Gene GM21_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1698 
Symbol 
ID8137029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1978545 
End bp1979918 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content58% 
IMG OID644869310 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003021510 
Protein GI253700321 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.000000740904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAGA ACATCAAGAT TCTGGTTATT GAAGACGACG ACAGCAGCCG CGAGGCGCTG 
CTCATCCTTT TGAAGTCGAT CGGCTTCACG GTCAAGGGAT GCGGCAGCGG GCAGGACGGT
TTGGGCGTCC TTTCCGGTGA GCCTTTCGAC ATCGTCATCA CAGACCTTTT CCTCCCCGAC
CTGAACGGGA TCGACATCCT GACCCGGGTA AAGGAGAGCT CCCCCCGCAC CGAAGTGATA
CTCGTCACCG GATACGGCTC CGCCGAGACA GCTGTGCAGG CGATGAAGAA AGGGGCCTAC
GACTACATCA CCAAGCCCCT CAACATAGAA GAACTCCGCA TCATCATCGA CAAGGCCCTT
GAGAAGGGGC AGCTCGTCAG CGAAAACGTC TACCTGAAAA AGCAGCTCAG GGAGAAGTAC
GAGTTCGCCA ACATCATCGG GAATTCCCAG GCGATGCAGC AGCTCTTCTC CAGGATGAAG
CGGATTATCA AGACCGACTC CACCGTTCTC ATCCTGGGCG AATCAGGAAC CGGCAAGGAG
CTCGTAGCCA AGGCGATCCA CTTCAACGGC AACCGCAAGG ACAAGCCGTT CATAGCCGTC
AACTGCTCCG CCATCCCCGA AAACCTCCTG GAGAGCGAAC TCTTCGGGCA CGTCAAGGGG
GCCTTCACCG GCGCGGTGAA AGAGAAGGTG GGAAAATTCG AAGCAGCAAA CTACGGCACC
ATCTTTCTCG ACGAGATCGG CACACTTCCC ATGCATCTGC AGACAAAGCT TTTGCGCGTG
CTGCAGGAGC AGGAACTGGA GCGGGTCGGC TCCAACAAGC AGATTAAGCT CGACGTTCGC
GTCGTCTCCG CCACCAACGT GAACCTGGAG GAAGAAGTCG CGCGCGGCAA TTTCCGCGAG
GACCTCTTTT ACCGGCTCAA CGTCATCCCC ATCCTGATTC CCCCCTTGCG GGAGCGGATC
GAAGACATAC TTCCCCTCAC TAAGCACTTC CTGGAAAAGA ACTGCCGTTC CATGCAGCGC
ACCATCATGC ACATCGACAA GGAAGCGTTG GAAGCCCTGG AGGCGTATCC CTGGAACGGG
AACGTGCGCG AGCTTGAGAA CATCATCGAG AGGATCGTGG CGCTGACCGA GGGAGACCTG
ATCACATTGC GGGACCTGCC GGCGAACATA GTGAAGAGCT ACGTCGAAGG GACCCCCACC
AGCGTCACCC CCGCCGGCAT AGACATGGTT GCCGCCATCA ACGAGATAGA AAAGCGGATG
ATAGGAGAGG CCTTGCAGTT AGCCGGCGGC GTCAAAGCCC GCGCCGCCGT CATGCTCAAC
ATCAACAGGA CCACCCTGGT GGAAAAGATG CGCAGACTGG GACTACCACT GTAG
 
Protein sequence
MKQNIKILVI EDDDSSREAL LILLKSIGFT VKGCGSGQDG LGVLSGEPFD IVITDLFLPD 
LNGIDILTRV KESSPRTEVI LVTGYGSAET AVQAMKKGAY DYITKPLNIE ELRIIIDKAL
EKGQLVSENV YLKKQLREKY EFANIIGNSQ AMQQLFSRMK RIIKTDSTVL ILGESGTGKE
LVAKAIHFNG NRKDKPFIAV NCSAIPENLL ESELFGHVKG AFTGAVKEKV GKFEAANYGT
IFLDEIGTLP MHLQTKLLRV LQEQELERVG SNKQIKLDVR VVSATNVNLE EEVARGNFRE
DLFYRLNVIP ILIPPLRERI EDILPLTKHF LEKNCRSMQR TIMHIDKEAL EALEAYPWNG
NVRELENIIE RIVALTEGDL ITLRDLPANI VKSYVEGTPT SVTPAGIDMV AAINEIEKRM
IGEALQLAGG VKARAAVMLN INRTTLVEKM RRLGLPL