| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1570 |
|---|
| Symbol | |
|---|
| ID | 8136901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1831160 |
|---|
| End bp | 1831861 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644869183 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003021383 |
|---|
| Protein GI | 253700194 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 104 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCATTG AAGAGGCGTT TGGCATTGTT ATCAGACGAC TGAGAAGAGA GCGTAACCTC
TCTCAGGAAA AGCTTTCCAC AGCCAGCTGC CTGGACCGCA AATTCATTTC GAACCTTGAG
GGCGGCAAAC AACAGCCGAG CCTTGTATCT GTTTTCGCTC TCGCGGGGGC GCTGAGTTCC
ACTGCGTCGA GTCTTCTTTA CGAAGCAGAG TTTATCCTCA GGATAAACAC GCCTGAAAAG
CTGAGGGCTG ACGGCGGTTG CGGCAAGATC GACTGGATCA GCAGCATGGA GATTATGATG
AACAACGGGC ATACTTGCTA TCAGGGAAGC GAAACTATCC TCATTGTAGA TGACGAAAAG
CAGCTGAGGG ACATGCTTTC CGACTTCCTC GCCAGCTACG GCTATACTGT CATCCTCGCT
GAAGACGGGC AGGATGCCCT GGAGAAGTAT AAGCAGAATC ACCCCGACAT TCATCTTGTG
GTGATGGACG TCGTCATGCC GCGCAAGGAC GGGCTCACCT GTTTCAGGCA GATAAAAGAA
TTGCACCCTG AAGCGAAGGT CCTCTTTATG AGCGGGTACC GCCCGGACCA TCTGCAGGCC
AAGGAAAATT TCAGAATGAT CCAGAAACCC TTTTCTCCGG TTGAGATGAT AAAGGCGATC
AGGCATGTCC TCGGAGATGG GATTGCCTTG TCTGACTCCT GA
|
|---|
| Protein sequence | MTIEEAFGIV IRRLRRERNL SQEKLSTASC LDRKFISNLE GGKQQPSLVS VFALAGALSS
TASSLLYEAE FILRINTPEK LRADGGCGKI DWISSMEIMM NNGHTCYQGS ETILIVDDEK
QLRDMLSDFL ASYGYTVILA EDGQDALEKY KQNHPDIHLV VMDVVMPRKD GLTCFRQIKE
LHPEAKVLFM SGYRPDHLQA KENFRMIQKP FSPVEMIKAI RHVLGDGIAL SDS
|
|---|
| |