Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1403 |
Symbol | |
ID | 8136731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1649964 |
End bp | 1650929 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644869017 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_003021220 |
Protein GI | 253700031 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.000126451 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAAA CGGTGGCCAT CGGCCCACTT GTGTTGAAGA ATCAGCTATT TCTGGCCCCG ATGGCGGGGA TCACCAATCT GCCGATGCGG ATCGTCTCCC GCGAGGGAGG GGCCTCGTTC GCCTTCACCG AGATGGTCAG CGTGAACGGC CTGACCCGGG AAGGGCGCAA GAGTTTCGAT CTGTTGAAAA GCTGCGCCGA GGACCGCCCC ATCGGGATGC AGCTTTTCGG GGACGACCCG GAGATGCTGG CCGAGGCGGC CCGCCTGGTG GAAGATCACG GCGAGCTGAT CGACATCAAC ATGGGGTGTC CGGTGCGCAA GGTGGTTGGA ACCGGCGCCG GCAGCGCGCT GATGAAGGAC CCCCGAAAGG TGGGGCGAAT CGTCAGGAGT GTCAGGGCCG CGACGAGGCT CCCGCTCACC ATAAAGATAC GGACCGGCTG GGTCTGCGGC GACGACACCT TCCTTGAGGT GGGGAGAATA GCCCAGGAGG AGGGGTGCGA CGCCGTGACG CTGCATCCCA GAAGCCGCGC CCAGATGTTC GAGGGGAAGG CCGACTGGTC CCGGATCGCC GAGCTGAAGA GCACGCTCAG CATTCCGGTG ATCGGCAGCG GCGATCTTTT CAGCGCCGCC GACGTAGCGG GGATGCTGGC CGAAACCGGA TGCGACGCCG TCATGGTGGC CCGCGGCGCC ATGGGGAACC CCTGGATCTT CCGTGAGGCG CTCTCGCTTT TGGCCGGGGA GGAGCCTGCT CCGCCCTCGG TGCAGGAGCG GCTGGCGCTC TCCCGCAGGC ACCTGGAGCT TTTCACCGAG TTCGCGGGAG GGCGGGTGGC GCTCATGGAG ATGCGCAAGC ACCTCTCCTG GTACTCAAAG GGACTGCCGG GGGCGGCGCA CTTTCGCGCG GCGGTGAACC GGATCGAAAG TGCTCCGGAG CTGATCCGGG CGATGGAGGA GTTCTTCGAT GTCTGA
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Protein sequence | MQKTVAIGPL VLKNQLFLAP MAGITNLPMR IVSREGGASF AFTEMVSVNG LTREGRKSFD LLKSCAEDRP IGMQLFGDDP EMLAEAARLV EDHGELIDIN MGCPVRKVVG TGAGSALMKD PRKVGRIVRS VRAATRLPLT IKIRTGWVCG DDTFLEVGRI AQEEGCDAVT LHPRSRAQMF EGKADWSRIA ELKSTLSIPV IGSGDLFSAA DVAGMLAETG CDAVMVARGA MGNPWIFREA LSLLAGEEPA PPSVQERLAL SRRHLELFTE FAGGRVALME MRKHLSWYSK GLPGAAHFRA AVNRIESAPE LIRAMEEFFD V
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