Gene GM21_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1379 
Symbol 
ID8136707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1627625 
End bp1628470 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content61% 
IMG OID644868993 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_003021196 
Protein GI253700007 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.526137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA CAGTCGGTGT TTTAGGGGCA GGGCAGATGG GGAGCGGGAT CGCCCACGTC 
TTCGCGCAGC ACGCTTACCA GGTCCTGGTC TACGACATTT CGGAGGCACA GCTCGACAAG
GCGCTCAAGT CCATTGAGCA GAACCTGGAG CGGCAGGCGA AGAAGGGGGT CATCTTCGAC
ACCAGCATCC AGGGGATCAT GGCCCGCATC ACCGCCACCA AGGAGCTCAA GGACTTCTCC
GGCTGCGACC TCGTCATCGA GGCCGCCACC GAAAACGAGG CGCTCAAGTT CGACCTTTTC
CGAAAGCTCG ACGAGGTGGT GAAGAAGGAG GCTATCCTCG CCTCCAATAC CTCCTCCATC
TCCATTACCC GCATCGCCGC CGTGACCAAG AGGCCGGAGC AGGTGATCGG GATGCACTTC
ATGAACCCGG TGCCGGTGAT GCAACTGGTC GAAGTGATCC GCGGCATCGC CACCAGCGAC
GAGACCTTCG AGGCCATAGG GCACCTGGTA GGTCTCCTGA ACAAGCAGAT GGCCGTCTCC
CAGGACTACC CCGGCTTCAT CGTGAACCGG GTGCTGATCC CGATGATAAA CGAGGCGGTC
TTCGCCCTCT ACGAAGGGAT AGCCACCGCC GAGGACATCG ACAAGGGGAT GAAGCTGGGA
ACCAACCAGC CGATGGGGCC CTTGCAGTTG GCCGACTTCA TCGGGCTCGA CACGGTGCTC
GCCATCTGCA ACGTGCTGCA CGACGGCTTC AAGGACCCGA AGTACCGCCC CTGTCCGCTC
CTGGTGAAGA TGGTGGACGC CGGCTACCTC GGCAAGAAGT CCGGGAAAGG CTTTTACAAC
TACTAG
 
Protein sequence
MFKTVGVLGA GQMGSGIAHV FAQHAYQVLV YDISEAQLDK ALKSIEQNLE RQAKKGVIFD 
TSIQGIMARI TATKELKDFS GCDLVIEAAT ENEALKFDLF RKLDEVVKKE AILASNTSSI
SITRIAAVTK RPEQVIGMHF MNPVPVMQLV EVIRGIATSD ETFEAIGHLV GLLNKQMAVS
QDYPGFIVNR VLIPMINEAV FALYEGIATA EDIDKGMKLG TNQPMGPLQL ADFIGLDTVL
AICNVLHDGF KDPKYRPCPL LVKMVDAGYL GKKSGKGFYN Y