| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1351 |
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| Symbol | |
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| ID | 8136679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 1591373 |
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| End bp | 1593952 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644868965 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003021168 |
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| Protein GI | 253699979 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00000000000000388966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAAA TGGATAAAGA TACTCTGACG GTGGAACTGG AAAGGCTGCG GCAGGAAAAC
GAGGTTCTCT CCGGGCAGGT CAAGCGGCTG GTCAAAGCGG AAAGCAGACT CTACGACTAT
CAGGAGAAAC TGGATCTTCA GCTCAAGGAA TACAGCGGGC TTTACGATCT CAATTCAAGG
CTCTACACCT GCCGCGACCT CCCCGCGATC TTCGATCTCG CCACAGAGTA TGTGATCGAC
AGGCTCGACT ACGAGCGGGT GCTGTTCTTC CAGAAAACGG AAAACAGCGA CGCCTATGCG
GTCCGCGCCT GCGACGGCTA CCATTACCCT CAGGAAAAAG AGGCTGTTTC CGCCCTCACC
CTCTCTCGTC AGGCTGCCAT CCTGACCCCG CTTTTCGCCG GGGCCAACTA CAGCATTTGC
ACGGAAGATT CGCAGTCGCC CGATCTTGTA GAACACCGGG ACCTGCTGCT GATGCACGAG
TATTTCATCT GCCCCTTGGG AACCCGAACC GACCCGGTAG CGTTTCTTGC CGTGGGAAAC
TCGGCGGAAA ATGCGGAGTT CTACCGTAGG ATCAGCGACA GCGAGGAGGC CCTTTTCGGC
CTCGGCAATC TGGTCGGGCT CCTCTCCTCC ACCATCGAAA ACCAGATCCT CTACACCGGG
ATGAAGAAGG CCCTTGAGCA GGAGCGCCTC GCAGAGGCGA AGTACCGGGG CATCTTCGAA
AACGCCATGG AGGGGATCTT CCAAACCACC CCCGAAGGGA AATTCCTCTC CTGCAACCCG
GCGACCGCCG CCATCTTGGG CTACAGCACC CCCGACAAGG TGCTGGAGGG GGTGGTCAAC
GTAGGGCTGC AACTCTACGT GGACCCGCAA CGACGCGACG AACTCTACGC CATGATGTTC
CAGCGGCAAA ACGTGAAGAA CTTCGAGGTC GAATTCCGCC GCAAGGACGG GAGCCGGATA
TGGGTCGATC TCAGTACCCG TCCAGCCTTC AACGAAGAGG GAGAACTGAT ACATATCGAC
GGGGTGATAC AGGACATCAC GGAGCGAAAG CACAACGAAG AGGCTCTGCG CAAGCTGTCC
CAGGTGGTCG AGCAGAGTCC CGTTTCCATC GTCATCACCG ACACCCAGGG TCGCATCGAA
TTCGTCAATC CGAAGTTCGT CCAGTTGACC GGGTATTCAC CCGGGGAGGT GCTGGGCCTG
AACCCGAGAT TCCTCAACTC CGGAAAGGCG CCGATCGAGA AATCGCGCAA ACTCTGGGAG
ACGATTCGGG CCGGCAAGGT CTGGGAAGGG GAGTTCCTGA ACCGGAAGAA GGATGGCGAA
CTCTTCTCCG AGCACGCAAC CATCTCTCCC ATCCGGAACA AGGAGGGGGT CATCACCCAT
TTCCTGGCCA TCAAGGAGGA CATCACCGAA CGGAAGCTTT TGGAAGCCCA GCTTTTCCAG
TCACAGAAGA TGGAGTCGAT CGGAAGGCTC GCCGGCGGCG TGGCGCACGA CTTCAACAAC
ATGCTGAGCG TCATCCTGGG GAGCGCGCAG CTGGCGATGC GCTGCGTCAC CGAGGGGACC
CCCGTCTGGC AGGACCTGGA ACAGATAGTA CAGGCGGGGA AGCGCTCCAG CCAGATCACC
CGCCAGCTTC TCGCCTTCTC CAGAAAGGAG ATCATCGCGC CGCGCGAGGT GAACCTGAAC
GAGCATTTCA CGGAGATGCA GAAGACGCTG GGGCGCCTGA TCGGCGAGGA CATCCGCATG
AATTTCAATC CGGCGCCCGG TCTTTGGACC ATCGATGCGG ACACGACGCA ACTGGATCAG
ATCCTGGTCA ACCTGGCGGT GAATGCACGC GACGCAATGG GCAACGGAGG GGTACTCACC
ATAGAAACGG CGAACGTCCG GGTGGATCGC AGCTACAGCC AGTTCCACCT GGATGCCTCC
CTTGGGGAAT ACGTGCAACT CGCGGTAAGC GACAACGGCT GCGGCATGGA CCGCGAGACG
CTGGCGCAGA TTTTCGAGCC CTTTTTCACC ACGAAAGAGG TGGGCAAGGG GACCGGGCTC
GGGCTCGCCA CCGTCTACGG CATCGTAAGA CAGCACAACG GCTTCATAAA CGTCTACAGC
GAACCGGGAC ATGGAACCAC CTTTCAGATA AACTTCCCGA GGTTTTCCGG AGCCGCGGTC
GAAGCTGCGA AAGACGAGGA GGTTTCGCTC AGCGGCTCGG GAACGGTGCT ATTGGTGGAG
GACGACCCGC TGGTGCGCAG AACAACCCTC AACACCTTGA AGGAGATCGG CTACCACGTC
ATCGAGGCGG CCGGCGCCGA TGAGGCGATC GCCTTTTGTC GCAAAAAAGA CACCGATCTC
GACGTGATCC TCACCGACGT GGTGATGCCC GGCATGAACG GCAAGGAGAT GGTCGACGCC
ATCGAGTCGT TTCGCCCGGG GCTCAAGGTG CTGTTCATGT CCGGCTACAC AAAAGACCTG
GTGGCGCAGC GTGGCGTGGC GGACGGAGGG AGACACTTCA TCCAGAAGCC TTTCGATATC
CACTCCCTGG CCGCAAAGCT GCGTGAAGCG ATGCGGCAAA AGCAGCGTGC CGGCTCCTGA
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| Protein sequence | MDKMDKDTLT VELERLRQEN EVLSGQVKRL VKAESRLYDY QEKLDLQLKE YSGLYDLNSR
LYTCRDLPAI FDLATEYVID RLDYERVLFF QKTENSDAYA VRACDGYHYP QEKEAVSALT
LSRQAAILTP LFAGANYSIC TEDSQSPDLV EHRDLLLMHE YFICPLGTRT DPVAFLAVGN
SAENAEFYRR ISDSEEALFG LGNLVGLLSS TIENQILYTG MKKALEQERL AEAKYRGIFE
NAMEGIFQTT PEGKFLSCNP ATAAILGYST PDKVLEGVVN VGLQLYVDPQ RRDELYAMMF
QRQNVKNFEV EFRRKDGSRI WVDLSTRPAF NEEGELIHID GVIQDITERK HNEEALRKLS
QVVEQSPVSI VITDTQGRIE FVNPKFVQLT GYSPGEVLGL NPRFLNSGKA PIEKSRKLWE
TIRAGKVWEG EFLNRKKDGE LFSEHATISP IRNKEGVITH FLAIKEDITE RKLLEAQLFQ
SQKMESIGRL AGGVAHDFNN MLSVILGSAQ LAMRCVTEGT PVWQDLEQIV QAGKRSSQIT
RQLLAFSRKE IIAPREVNLN EHFTEMQKTL GRLIGEDIRM NFNPAPGLWT IDADTTQLDQ
ILVNLAVNAR DAMGNGGVLT IETANVRVDR SYSQFHLDAS LGEYVQLAVS DNGCGMDRET
LAQIFEPFFT TKEVGKGTGL GLATVYGIVR QHNGFINVYS EPGHGTTFQI NFPRFSGAAV
EAAKDEEVSL SGSGTVLLVE DDPLVRRTTL NTLKEIGYHV IEAAGADEAI AFCRKKDTDL
DVILTDVVMP GMNGKEMVDA IESFRPGLKV LFMSGYTKDL VAQRGVADGG RHFIQKPFDI
HSLAAKLREA MRQKQRAGS
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