Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1306 |
Symbol | |
ID | 8136633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1534561 |
End bp | 1535073 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644868920 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003021124 |
Protein GI | 253699935 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00000000000000237827 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCAACT CGCTTACCCA GGAGGAACTG GCCAGCCGCG CCGATCTTAC CAAAGGTTTC ATCTCGCAGT TGGAGAACGA CGCCACTTCG CCGTCGATTG CGACGCTGAA GGACATCGTC GACGTTTTCG GCATCAGCAT GCAGGAGTTC TTCAGCGAGG AGACCGACCA AGACATCGTT TTTGGCAAGG AAGCCCGGGT TCAGGCCACC GATGACGGCG ACAGCGTCAA GGTGGAACTG CTGGTGCCGG GGGCTCAGAA CCGGGACATG GACCCGGTGC TGGTGACGCT GGACCCCGGC GGCGAGATGG ACGAACAGCC GATACACGAA GGCGAGGAGT TCGGCTACGT GATCTCGGGG AAGGTGCAGC TCAGGCTGGA CGACAAGCTG TACACGGTGG ACAAGGGTGA GTGTTTCTAT TTCGCTTCCG ACCGCAAGCA CGCGGTGAAA AATGTTGGGA AAAGCGCGGC GAAGCTTCTC TGGGTTGTGA CGCCGCCAAC GTTTTACTAT TGA
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Protein sequence | MVNSLTQEEL ASRADLTKGF ISQLENDATS PSIATLKDIV DVFGISMQEF FSEETDQDIV FGKEARVQAT DDGDSVKVEL LVPGAQNRDM DPVLVTLDPG GEMDEQPIHE GEEFGYVISG KVQLRLDDKL YTVDKGECFY FASDRKHAVK NVGKSAAKLL WVVTPPTFYY
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