Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1212 |
Symbol | |
ID | 8136537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1419213 |
End bp | 1420247 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644868826 |
Product | type VI secretion protein, VC_A0111 family |
Protein accession | YP_003021031 |
Protein GI | 253699842 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 134 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTCCG CCGGGACCGA AGGATGTCCA GAAGCAAGAA AGCGCCTGTT GCGTGAGTTT CACCGCCATT CCTTTTACCA GGCGGTGAAT TATCTTGAGC GCAGCCGGTT TGGTGGGCGC GATTTCGGGC AGGCCATGAG TCCGAAAGAA GAGCCGGTCC GGTTCCGTGC CCGCACCGGC TTTTCATTTC CTGCCAGTGA CATAGCGAAC CTGGAGGAGG GAAAGGACGG AGCCCCCCCG CAGATGGAAG TGGCGTTCAT GGGAGTGGTC GGGCCGTCGG GAACGCTCCC CAACTGGTAC CACGAACTGG CGCTGGAGCG GGGCCGGGCG AAGGATCCGG CGATGATAGC CTTTTACGAT CTCTTCCATC ACCGGCTCAT CTCGCTTTTT TACCTTGTCT GGAAGCGAGG TCGCGTCATG CCCGGCAAGA AGAGCGACCA TTCAGACCGC TTTTCCAACT ATCTACTCAA CCTCATCGGG CTTGGAACAC CGGGAATAGC CGGGGTCTGC TCTCCTGGAC GAGTACCGCT TTTCTTCTGT GGACAGATCT CCCGAAACAT CCCCACCGCT GGAATGGTAG CCGCGGTTGT GCAGTACCAG CTAGGCCTGA CGGCGGAAGT GGAGCAGTTC GTGCCCCGGC TGATCGCTTT GGAACCGGAG GAGAGGACGA CCGTTGGAGA AGGCAATTGC GTGCTTGGTA AAAATGCGAG CTGCGGCGGT GAAGTATGGG AGAGCCAGAC TACCTTCCGC CTCTGTCTCG GCCCCATGTT CTTTCGAGAG TTCAACAACA TGCTACCCGG GGGGGACAGG CTAGCCTCGC TCGTCGCACT GGTCAGGTAT CTGGTTGGCG TGGAGTACGA GTTCGAGGTG CGGCTGGTGT TAAAGAAGGA AGAAGTTCCA ACGTTGAAGC TGGGAGAAAC AGGGCCGGAT GCACCAAGGC TTGGGTTGTC GATGTGGATG AAGACGCCGG GGACGACGTT GTCAGTCGAT CCTTACGTGA CACTGCGGGA AGACGATCTC GCCCGTTCCG TCTGA
|
Protein sequence | MRSAGTEGCP EARKRLLREF HRHSFYQAVN YLERSRFGGR DFGQAMSPKE EPVRFRARTG FSFPASDIAN LEEGKDGAPP QMEVAFMGVV GPSGTLPNWY HELALERGRA KDPAMIAFYD LFHHRLISLF YLVWKRGRVM PGKKSDHSDR FSNYLLNLIG LGTPGIAGVC SPGRVPLFFC GQISRNIPTA GMVAAVVQYQ LGLTAEVEQF VPRLIALEPE ERTTVGEGNC VLGKNASCGG EVWESQTTFR LCLGPMFFRE FNNMLPGGDR LASLVALVRY LVGVEYEFEV RLVLKKEEVP TLKLGETGPD APRLGLSMWM KTPGTTLSVD PYVTLREDDL ARSV
|
| |