Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1180 |
Symbol | |
ID | 8136504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1370962 |
End bp | 1373448 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644868793 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_003020999 |
Protein GI | 253699810 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 2.9477e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTTAAAC CCGCCACCAT CGATGCCGTT CTCCCGCAAC TGGCCGAGGC GCTGGAATTG CGCAACGTGG CCGTGCTCCA GGCCCCGCCG GGCGCCGGGA AGACGACCCG CGTCCCGCTG GCCCTCATGG ACGCCCCCTT TCTCAAGGGG GGAAAGATCG TCATGCTCGA GCCGCGCCGG CTGGCCGCCG TCAACGCCGC CCGCTACATG GCCCAGTGTC TGGGCGAGGA AGTAGGGAGG CGCGTAGGCT ACGGCATCAG GTTCGAGCGC AAGGTCTCAT CCGCCACCCG GATCGAGGTC GTTACCGAGG GGATCCTGGC CAGGAGGCTG CAAAGCGACC CGCTGCTGGA AGGGGTGTCG GCGGTGATCT TCGACGAGTT TCACGAGCGG AGCCTTACCT GCGACCTCTC CCTGGCACTT TGCCGGGACG TGCAGCTTGG GCTGCGCGAG GATCTCCGGC TCCTGGTCAT GTCGGCTACG CTCGACGCCG AGCCGGTGGC GCAGCTTCTC GGCGGCGCGC CGCTCATAAC CACTGTCGGG CGCGAGTACC CGGTGGAAAT CAGGTACCTG AAGGGCGAGC CATCGGCACG GCTGGCCGAA ACCACCTGCG CCGCGGTCCT CAACGCTCTC TCCGAGACCC AGGGCGACAT CCTCGTTTTC CTCCCCGGCG CCGGCGACAT AAGGCGTTGC GAAACGATCC TGCAGCAAAA GCTCGGCCCC CAAGTCATGG TCGCGGTCCT CTACGGAGAC CTCCCCTTCG CCGCGCAGGA GCGCGCCATT TTGCCGGCGG ATCGCCGCAA GGTGGTACTC GCCACCAACA TCGCCGAGAC CAGCCTCACC ATCGAGGGGG TCCGCGTGGT GGTGGATTCC GGCTTCTCCC GACAGCTCCG CTTCGATCCT TCGACCGGCC TTAACCGCCT GGGTACCATG CGGATATCGG CAGCCTCCGC CCAGCAGCGC GCCGGCCGTG CCGGCAGGGT GGCACCCGGC GTCTGCTATC GCCTTTGGAC CGAGCACGTC CAAACGACCC TCCTTCCGTT CACCCCTCCA GAGATAAAGG TCTCCGATCT TACGCCGCTC GCCCTCGACC TGGCGCAGTG GGGTGTCGCC GATCCCGCTT CGCTGAGCTT TCTCGACCTG CCGCCGGCGG CCCATCTCGC CGAGGGGAGG GCGCTCTTGC AATCCCTGGG GGCGCTTGAT CCGCGCGGGA GCCTCACTCC CCTGGGAAAG AAGATGGCGG CGCTCCCCAT GCACCCGCGC TTGTCCGCGA TGCTCGCCGG CTCCCTGGCG ATAGGCCACG GGGGGCTCGC CTGCACGCTG GCAGCCATCC TCTCCGAGCG CGACCTCCTG CCGCGCGGGG GGGGGACCGT CTCCGACAGC GATCTTCTCG ACCGGCTGGA CGCATTGATC GAGCGCCGGG ACCCGCAGGC GTCCCGCACC GTGGAAAGAC TTGCGACTTA TTTCAGGAAC GCTCTCGGGG TGCGGGGGGG GCATGTGGAG GGCGATGCCT CGGTCGTGGG AGAACTACTT CTGATGGCGT ACCCCGACCG GGTGGCCCGG GAGAGAAGCC CCGGCTCCGG CCGTTACCTG ATGGCCAACG GCAGCGGAGC GCGCCTGTCG CGCAGAAGCA ACTTGCGGTC GCAGCAGTTC ATCGTGGCGG TCGAGGTCGA GGTCGAGGGG GGCGGGTCCG AGGGCGAGAT ACATATGGCG AGCGCCGTCA CCCTTGACGC TGTGCGCTCA GGGTGCGCCG GCGCCGTTAC CCGCGAGCGG CGGGTCTTTT GGGACGAGCG AGAGGGGAGG GTGGCTGCCC GCGAAGAGGA ACGCCTCGGG GCCATCGTCC TCTCCGAGCG CGCCGCGACC CCGGACAAAG GGGAGATCGG CGCAGCTCTT TTGGGCGGCA TCTTGTCCGG CCCCGGCCTG TCCGGGCTTA ACTGGAGCGA CGAGGCGCGG CAGTTTCAGA ACCGGGTGAA TTTCCTGCGC CGCGTGCTGC CGGAGGAGGG GCTGCCGGAT TTGTCGGAGC GGGCCTTGAC GGAGACAATG GAGCGATGGC TCCTTCCCTA CCTCGATGGG GTGAGGTCGC TCGCCCACCT GGCGCGGGTG GACCTCCGTG AGCCTTTGAA GGGGATGCTT GAGTGGCGGC AGCAAAAGCT CGTCGACGAT GAGGCTCCGA CCCATCTCAA GGTCCCCAGC GGCTCCCGCA TCGCCCTGGA ATACCCGGCC GAGGGGGACC CCTTTCTCGC CGTCAAACTG CAGGAGATGT TCGGACTCGC CGAGACGCCG CGGGTGGCAA AGGGGAGGGT TCCCGTGCTG ATCCACCTGC TGTCGCCTGC CCGCCGTCCC ATCCAGGTGA CCTCGGACTT GAAGAGCTTC TGGAACGGTG CCTACCGAGA GGTGTGCAAG GAGTTGAAGG GGCGCTACCC GAAGCACCCC TGGCCGGACG ACCCATGGAA CGCGCCGGCT ACCAGGCACG TGAAGAAGAG GATGTGA
|
Protein sequence | MLKPATIDAV LPQLAEALEL RNVAVLQAPP GAGKTTRVPL ALMDAPFLKG GKIVMLEPRR LAAVNAARYM AQCLGEEVGR RVGYGIRFER KVSSATRIEV VTEGILARRL QSDPLLEGVS AVIFDEFHER SLTCDLSLAL CRDVQLGLRE DLRLLVMSAT LDAEPVAQLL GGAPLITTVG REYPVEIRYL KGEPSARLAE TTCAAVLNAL SETQGDILVF LPGAGDIRRC ETILQQKLGP QVMVAVLYGD LPFAAQERAI LPADRRKVVL ATNIAETSLT IEGVRVVVDS GFSRQLRFDP STGLNRLGTM RISAASAQQR AGRAGRVAPG VCYRLWTEHV QTTLLPFTPP EIKVSDLTPL ALDLAQWGVA DPASLSFLDL PPAAHLAEGR ALLQSLGALD PRGSLTPLGK KMAALPMHPR LSAMLAGSLA IGHGGLACTL AAILSERDLL PRGGGTVSDS DLLDRLDALI ERRDPQASRT VERLATYFRN ALGVRGGHVE GDASVVGELL LMAYPDRVAR ERSPGSGRYL MANGSGARLS RRSNLRSQQF IVAVEVEVEG GGSEGEIHMA SAVTLDAVRS GCAGAVTRER RVFWDEREGR VAAREEERLG AIVLSERAAT PDKGEIGAAL LGGILSGPGL SGLNWSDEAR QFQNRVNFLR RVLPEEGLPD LSERALTETM ERWLLPYLDG VRSLAHLARV DLREPLKGML EWRQQKLVDD EAPTHLKVPS GSRIALEYPA EGDPFLAVKL QEMFGLAETP RVAKGRVPVL IHLLSPARRP IQVTSDLKSF WNGAYREVCK ELKGRYPKHP WPDDPWNAPA TRHVKKRM
|
| |