| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1172 |
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| Symbol | |
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| ID | 8136494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1364581 |
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| End bp | 1365381 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644868783 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003020991 |
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| Protein GI | 253699802 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 4.8005300000000004e-32 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGAAC GTTTACAGAA GATACTATCG CAGGCAGGTG TTGCTTCCCG ACGCGAGTCG
GAAGGGATAA TCGCCGCGGG GAGGGTGGCC GTCAACGGCA CGGTGGTGAC GGAGCTGGGG
ACGAAGGCCG ACCCCGACAC CGACACCATA ACCCTGGACG GCAAGCCGAT CACGATCGAA
GAGAAGCGCG TCTACATCCT GCTCTACAAG CCGGTCGGCT ACATGACCAC CATGAAGGAC
CCCGAAGGGC GCCCGATCGT GAGCGATCTC CTCAAGGGGG TGAAGGAGCG GGTGTACCCC
ATCGGCCGCC TGGACTACAA CACCGAGGGG CTGCTCCTTT TGACCAACGA CGGGGCGCTC
GCCAACTCGC TGATGCACCC AAGCCACGAG GTGGACAAGG GGTACCTGGT AAGGGTGAGC
GGGCAGGTAT CTCCCCTCCA GATCAAGAAG CTTTCCGAGG GGGTGAAACT TGAGGACGGC
ATGACCGCTC CCGCCAAGGT GCTCCCTATG AGCGAGAGCG AGAACAACTC CTGGATCTCG
ATCACCATCC ACGAGGGGCG CTACCGCCAG GTGCGGCGCA TGTGCGAGGC TGTGGGGCTG
AACGTGGTGC GCCTGAAACG TGCCCGCTAC GACTTCCTTG AGATAGGCGA CATGAAGCCC
GGGGAGTACA GGCACCTGGC GCCTGAAGAA GTGACGCGGC TCAACAGGAA GATGGCCCCG
GTGGGCACGG GGCGCGGTCC GCGCAAGACC GGAGTGGTGG CTAGGCGAGG TTCGACAGGC
CCGGGTAGGC GGACACGCTG A
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| Protein sequence | MLERLQKILS QAGVASRRES EGIIAAGRVA VNGTVVTELG TKADPDTDTI TLDGKPITIE
EKRVYILLYK PVGYMTTMKD PEGRPIVSDL LKGVKERVYP IGRLDYNTEG LLLLTNDGAL
ANSLMHPSHE VDKGYLVRVS GQVSPLQIKK LSEGVKLEDG MTAPAKVLPM SESENNSWIS
ITIHEGRYRQ VRRMCEAVGL NVVRLKRARY DFLEIGDMKP GEYRHLAPEE VTRLNRKMAP
VGTGRGPRKT GVVARRGSTG PGRRTR
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