| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1052 |
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| Symbol | |
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| ID | 8136374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1233616 |
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| End bp | 1235766 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644868663 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003020871 |
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| Protein GI | 253699682 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.00000106243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAAGAC TCAACGACAT ACTCGAAAAG GTCGCCTCCT ACAACCCCGG TTGCGACCTC
GACCTGCTCC GCAAAGCCTA CGTCTTCTGC GCCAAGGTGC ACCAGGGGCA GACCAGGCTC
TCGGGAGAGC CGTACCTGAT ACACCCCATG GAGGTGGCCG GGATACTGGC GGACTTGCGC
CTGGACCTCG CGGCGGTGGT CACCGGGCTC TTGCACGACA CGGTCGAGGA CACCCTGACC
ACGCACGAGG AGCTGGAGTC GCTTTTCGGC GCCGAGGTGG CGAGGCTCGT CGACGGCGTC
ACCAAGATCG GCAAGATCCA CTTCAAGACC AAGGAGGAGA GCCAGGCGGA GAACTTCCGC
AAGATGCTTC TCGCCATGGC CACCGACATC AGGGTCATCC TGGTGAAGCT CGCCGACCGT
CTGCACAACA TGCGCACCCT GCAGTACCAG CCCGAGCCCA AGCAGCGCAC CATCGCCAAG
GAAACCCTCG ACATCTACGC CCCCATCGCC AACCGGCTCG GTATCTCCTG GGTCAAGGGG
GAGCTGGAGG ACCTTTCCTT CCGCTACCTG GAGCCCCAGC TCTATTACGA CCTGGCCGGC
AAGGTGGCTA AGAAGAAGCA GGAGCGAGAG TCCTACGTCG CGACGGTTAA GGAGATCATC
AAGAAGCAGC TCGAAGAGCA CGGCATCAAG GGTGACGTCT CCGGGCGCTC CAAGCACCTC
TATTCCATCT ACCGCAAGAT GCAGAGCCGC AACGTCGACA TCGACGAGAT CTACGACCTG
ATCGCGATCC GCGTCTCGGT GGAGGATATC CGCGAGTGCT ACGAGGTGCT GGGGATCATC
CATTCCACCT GGAAGCCGAT CCCCGGACGC TTCAAGGACT ACATCGCCAT GCCCAAGGGG
AACATGTACC AGTCGCTGCA CACGACGGTC ATCGGCCCCT ACGGCGAACG CATGGAGGTG
CAGATCCGCA CCGTGGAGAT GCACCGCGTG GCGGAGTCGG GGATCGCGGC GCACTGGAAG
TACAAGGAAG GGAAGGGGTA CGACGAGAAG GACGTCAAGC GCTTCACCTG GATCCGGCAG
CTCCTCGAAT GGCAGCAGGA ACTCGACGAC TCCAAGGAAT TCATGGACAC CGTCAAGGTC
GAGCTCTTCC CCGAGGACGT CTTCATCTTC ACCCCGAAAG GGGACGTGAA GGGGTTCCCC
AAGGGGTCGA CCCCCATCGA CTTCGCCTAT TCGGTCCACA CCGACGTGGG GCACCGCTGC
GTCGGCGCCA AGGTGAACGG CAAGCTGGTC CCGCTCAAGT ACGAGCTGAA GACAGGCGAC
ATCGTCGAGG TAATTACCTC GCCGCACCAC ACCCCCTCCA AGGACTGGCT GAAGATAGTC
AAGAGCTCGC GCGCGCGCAA CAAGATCAGG GCCTGGGTGA AGACCGAGGA GCGGATGCGG
AGCATCACCC TGGGTCGCGA GATCTGCGAG AAGGAATTCC GACGCTTCTC GCTCAACTTC
GGCAAGCTGC AAAAGGCAGG CGAGCTGAAG AAGGCGGCCC AGGAGTTCGG CTTCGTGGCC
GAGGACGACC TGATGGCGTC GGTGGGGTAC GGCAAGCTCT CCGTGAACCA GATCCTCTCC
AAGCTGGTAC CGGCCGACAA GCTTGACGCC GCCAAGGAGC AGAAGGAAAC GCGGATCGGG
AAGGTGATCG AGAAGCTGAA GGGGAAATCC TCCTCGGCGA TCCAGATCAG CGGGGTCGAG
GACGTGCTGG TGCGCTTCGG CAAGTGCTGC AATCCGCTAC CGGGCGATGA CATCACCGGC
TTCATCACCC GGGGGCGCGG GGTCACCATC CACACGGCGG ATTGCCCCTT CGCCATGGCG
CTGGAGCCCG AGCGCCGCAT CGAGGTGGCC TGGAACAAGG GGAGAAAGAG CGCGCTCCCG
GTCAAGATCC GCGTGGTCTG CAACGACGAA AAGGGGATCC TGGCGAACAT CGCCACCGCC
ATCACCAACT GCGAGGCCAA CATCTCCAGC GCCTCCATCC AGAGCACCCT CGACAAGCGG
GGCGAGAACC TCTTCGAGGT GGACGTGACC GATCTCGACC ACCTGAAGAA GGTGTTCGCC
GCCATCATGA AGGTGAAGGG TGTCATCAAG GTGGAAAGGC TGAGAAGCTA G
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| Protein sequence | MIRLNDILEK VASYNPGCDL DLLRKAYVFC AKVHQGQTRL SGEPYLIHPM EVAGILADLR
LDLAAVVTGL LHDTVEDTLT THEELESLFG AEVARLVDGV TKIGKIHFKT KEESQAENFR
KMLLAMATDI RVILVKLADR LHNMRTLQYQ PEPKQRTIAK ETLDIYAPIA NRLGISWVKG
ELEDLSFRYL EPQLYYDLAG KVAKKKQERE SYVATVKEII KKQLEEHGIK GDVSGRSKHL
YSIYRKMQSR NVDIDEIYDL IAIRVSVEDI RECYEVLGII HSTWKPIPGR FKDYIAMPKG
NMYQSLHTTV IGPYGERMEV QIRTVEMHRV AESGIAAHWK YKEGKGYDEK DVKRFTWIRQ
LLEWQQELDD SKEFMDTVKV ELFPEDVFIF TPKGDVKGFP KGSTPIDFAY SVHTDVGHRC
VGAKVNGKLV PLKYELKTGD IVEVITSPHH TPSKDWLKIV KSSRARNKIR AWVKTEERMR
SITLGREICE KEFRRFSLNF GKLQKAGELK KAAQEFGFVA EDDLMASVGY GKLSVNQILS
KLVPADKLDA AKEQKETRIG KVIEKLKGKS SSAIQISGVE DVLVRFGKCC NPLPGDDITG
FITRGRGVTI HTADCPFAMA LEPERRIEVA WNKGRKSALP VKIRVVCNDE KGILANIATA
ITNCEANISS ASIQSTLDKR GENLFEVDVT DLDHLKKVFA AIMKVKGVIK VERLRS
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