Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0986 |
Symbol | |
ID | 8136307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1165100 |
End bp | 1166317 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644868600 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003020809 |
Protein GI | 253699620 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 0.831389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGG ACGACCTTAA CAAGCTCACC ATCGACAAAA AGCGCTATTC CCCGGCAACG GGCGGCAAAA GCCCCTGGCG CTCCAGGATC ATAGCGGCGT CGCTGGCGAT CCTCCTGGCC TTGGCCCTTT TCGGCTGGGC CGCGCGGCGC AGCGTCGAGG TGGAGGTAGC CACGGTCTCC CTGGTTTACC CCTCCCAGAC CTTTTCCCTC TTGAACGCGA GCGGCTACGT GGTGGCGCAG AGAAAAGCCG CCGTATCCTC CAAGGCGACC GGTCGCCTGG AATGGCTCGG GGTCCAGGAG GGGAGCGTGG TGCGGCAGGG GGAACTTCTG GCCCGCCTGG AAAACCGGGA CGTCGCCGCT CAAAAAGGGG AGGCAGAGGC GAGCGTCTCC GCGGCCGAGA AGAACCTGGA GCAGGCCCGG GTGGAGCAAA AGGACGCGGC GCGAAACCTT GCGCGCATGA AAGAGCTGGT CTCCCAGGGG ATCGTGGCGC AGGCCGATTA CGATACGGCG GAGGCGCGTT ACCAGCGCGC CGTCGCGTCG AGCGCCGCAG CCCAGGCGAA CCTGAAGGGG GCTTCGAGCG CGCTGCAGGG GGCCGAGGCG TCGCTCGACT ACACGCTGAT CCGCGCCCCC TTCGACGGGG TGGTGTTGAC CAAGAACGCC GATGTGGGGG ATATCGTTTC CCCGCTTGCC GCCGCCGCCA ACGCCAAGGC AGCCGTCGTC ACCCTGGCCG ACATGGGGTC GCTCGAAGTC GAGGCTGACG TTTCCGAAGC GAACCTCGGC AAGGTGCGCG TGGGGCAGCC CTGCGAGATC CTCCTGGACG CCCTCCCCGA GGCGCGCTTT CGCGGGGCGC TGCAGACCAT AGTACCTACC GCCGACCGCA GCAAGGGGAG CGTCATGGTG AAGGTCCGTT TCCTCGACCA GGACCAACGC ATCCTTCCCG AGATGAGCGC CAAGGTCGCG TTCCTGGAGC GGGATTTGAA GCCGGGAGAG GGGAGGCCGC GGGTGGCGAT CCCCCCTGCC GCGGTGGTCA AGCGCGACGG CAAGGAGTTC GTCTTCGTCG TCGCCGGCGA CCGCGTGCGG CTGACCCCGG TCACGCTCGG AGGGAAGCTC GGGGACATGG TCGAGGTGGT TTCCGGCATC AAGGCGGGGG ACCGGATCGC CACCAAGCCC CTGGACCGGT TGAAGGACAA AAGCCGCGTC AAGACGGCGG AAAAATAG
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Protein sequence | MAQDDLNKLT IDKKRYSPAT GGKSPWRSRI IAASLAILLA LALFGWAARR SVEVEVATVS LVYPSQTFSL LNASGYVVAQ RKAAVSSKAT GRLEWLGVQE GSVVRQGELL ARLENRDVAA QKGEAEASVS AAEKNLEQAR VEQKDAARNL ARMKELVSQG IVAQADYDTA EARYQRAVAS SAAAQANLKG ASSALQGAEA SLDYTLIRAP FDGVVLTKNA DVGDIVSPLA AAANAKAAVV TLADMGSLEV EADVSEANLG KVRVGQPCEI LLDALPEARF RGALQTIVPT ADRSKGSVMV KVRFLDQDQR ILPEMSAKVA FLERDLKPGE GRPRVAIPPA AVVKRDGKEF VFVVAGDRVR LTPVTLGGKL GDMVEVVSGI KAGDRIATKP LDRLKDKSRV KTAEK
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