Gene GM21_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0962 
Symbol 
ID8136283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1138555 
End bp1139931 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content63% 
IMG OID644868576 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003020785 
Protein GI253699596 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.277353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCATACTGAT AGTTGACGAC GAGGAAGGGA TCCGATCCTC CCTGGCCGGC 
ATCCTGGAAG ACGAGGGATA CCGGACTGTC TGCGCCGCCG ACGGGGTCGA AGCGCTCGCG
CTTTGCGCCC GTGAGCTGCC GGGGCTCGTG CTCTTGGATA TCTGGATGCC CAAGATGGAC
GGCATCCAGA CGCTGCAGCG CCTGAAGGAA TCGCACCCCT TCCTGAACGT CATCATGATG
AGCGGCCACG GCACCATCGA GACGGCGGTG AAATCAACCA AGCTGGGCGC CTACGACTTC
ATCGAGAAGC CGCTTTCGCT GGAGAAGGTG GTGGTCACGG TGGAAAACGC CCTGGCGATG
AACCGCCTGA AGGAGGAGAA CGCCGCCCTG CGCGACCAGG TGCAGCAGGG GCACGAGATG
ATCGGGAACT CCGCCGCCAT GCTGCAGTTG GGCGAGCAGA TTCGCCTTGT GGCACCTACC
AACGCCTCGG TGCTGATCAC CGGCGAGAAC GGCACCGGCA AGGAACTGGT GGCCCGCTCG
GTCCATTTCC ATAGCCTGCG CCGCGACAAG CCCTTCATCG AGATCAACTG CGCCGCCATC
CCCGAGGAGC TGATCGAGAG CGAACTCTTC GGCCACGAGC GGGGTGCCTT CACCGGTGCG
GTGGCGCAGA AGAAGGGGAA ATTCGACCTG GCCGACGGCG GCACCCTCTT TCTGGACGAG
ATCGGCGACA TGTCGCTCAA GACCCAGGCC AAGGTGCTGC GTATCCTGCA GGAGAAGAAG
TTCGAGCGGG TGGGTGGAAC AAGGACCCTG GAGGTGGACG TCCGCATCGT CGCCGCCACC
AACAAGCTCC TCGAGGAGGA GATCAGAAAC GGCGGTTTCC GCGAGGACCT CTACTACCGG
CTGAACGTGG TCCCCTTCAA GGTCCCCCCC TTGAGGGAGC GGCGCGACGA CATACCGCTT
CTCTCCCGGT ATTTCCTGGA CGCCTTCTGC TCGCGTGAGG GGAGGGAGTC GAAGAGGATC
GTCCCCGAGG CCATGGAGGC GCTCAAGCGC TACGAATGGC CGGGGAACGT GCGCGAGCTG
AAGAACATCG TGGAAAGGCT GGTGATCATG ACCCCCGGCG GCACGGTGAC CGTCGACCAC
CTCCCCGACT ACTTCCACGG CGACGGTGCC GGGAAGGATG CGGGGGGCGG CAAGCTGGAC
AGCGTCTTGG AGCTCTCCAG CCTGCGCGAG GCGCGCGAGG AGTTCGAGCG GGAGTTCATC
ATCCAGAAGC TGGAGGAGAA CGACTGGAAC GTCTCGAAGA CCGCCGAGGC CATCGAGCTT
GAGCGGAGCA ACCTGCACCG CAAGATCAAG AGCTACGGCA TAGACATGAA GAAATAG
 
Protein sequence
MTETILIVDD EEGIRSSLAG ILEDEGYRTV CAADGVEALA LCARELPGLV LLDIWMPKMD 
GIQTLQRLKE SHPFLNVIMM SGHGTIETAV KSTKLGAYDF IEKPLSLEKV VVTVENALAM
NRLKEENAAL RDQVQQGHEM IGNSAAMLQL GEQIRLVAPT NASVLITGEN GTGKELVARS
VHFHSLRRDK PFIEINCAAI PEELIESELF GHERGAFTGA VAQKKGKFDL ADGGTLFLDE
IGDMSLKTQA KVLRILQEKK FERVGGTRTL EVDVRIVAAT NKLLEEEIRN GGFREDLYYR
LNVVPFKVPP LRERRDDIPL LSRYFLDAFC SREGRESKRI VPEAMEALKR YEWPGNVREL
KNIVERLVIM TPGGTVTVDH LPDYFHGDGA GKDAGGGKLD SVLELSSLRE AREEFEREFI
IQKLEENDWN VSKTAEAIEL ERSNLHRKIK SYGIDMKK