| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0944 |
|---|
| Symbol | |
|---|
| ID | 8136265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1119018 |
|---|
| End bp | 1120484 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644868559 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003020768 |
|---|
| Protein GI | 253699579 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.000000117321 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA CCCCCGCAGG GCGTTCGGCG CGGGCCGTTG ATCCGGGTTG CGTGCTGCTG
GTACGCCCCC CCGATCCTTT CCAGGGGGCG GCGCTTCTCT CCCATACCCG CCCGATGAAC
CTCGCCTACC TCGCCTCCAC CCTGCGCCAG GCGGGGCTGC AGGTGGCTAT CGCCGACTAC
GAGGCGACCC CCTACAGCGA AGAACACCTC GCGGCGCTTT TGCAGCGGCT TTCCCCGGCG
CTGGTCGGCT TTTCCGCCAC CACCCCCACC ATAGAGAGCG CGGCCGGGCT CGCCCGTGCA
GTGAAGCGGA GGCGCGGCGA AGCGGTCACC GTGATTGGGG GGAGCCACGC GAGCGCCCTT
CCCAAGGAGA CGCTGGAAGA ATTCCCCTCC TTCGACTACC TGGTTCGCGG AGAGGGGGAG
CTGACGCTTG CGGAGCTTTC CCTGAGGCTG CGGGACGGCG GCTCAGATCA GGACATTCGG
GGGATCGCCT ACCGCTACGG GGAAGGGATC AGGGTGAACC CGCCCCGCGA ACTGGTCGCC
GACCTCGACT CGCTTCCTTT TCCCGCCCGC GACCTCCTCG ACTATTCCCC CCGCGCCGGC
CATTCCAGCC GCGGGTTTTC CAACGCGCTT CGCTCCGGCG AACTCTTCAC CTCGCGCGGC
TGCCCCGTCG CCTGCTCCTT CTGCGCCATC CAGGCCACCT TCGGCAGGAG CGTCCGTTTC
CGGGACCCTC TCTTCATAGC CGACGAGCTG GACCGGATGG TGCGCGAGCA GAAGGTGAAC
CACGTGGTGA TCGCCGACGA CACCTTCACG CTCAACCCCG AGCGCGCCGC GAGCATCTGC
GAGATCCTCT CGCGCAGCGG CATCCGTTCC TGGAACTGCG ACACCAGGGT GAACACGGTG
ACGCCGGAGC TGCTGCGGTT GATGCGGCGC TGCGGCTGCG AGAAAGTGGC CTTCGGCGTC
GAGAGCGGCA GTCCGCGCCT TTTGGAGCTG ATGGGGAAGG GGATCACGGT CGGGCAGGTC
GAGCGCGCGG TGCGCTGGGC CAGGGAGGCG GGGATCAGGC ATGTCGAGGG GAACTTCATC
ATAGGGTGCG ACCCTTCGGA AACCCGGGAG GATCTGGAGC AGACCCGGAG GCTGATCCGG
GGGCTTCCCT GGAGTTTCGT CTCCGTTTCC GTGGTGGTTC CCTATCCCGG TACGCCTCTC
AGGGAGAAGA TGCTCGCCGC TGGGCTGATC GAGCCGGGGG TCCCCTGGGA GGATTACGTC
ATCTTCGGCA AGAAGCCGCG CTGGCGCACC GCGAACTTCA GCGCGGAGGA ACTCCTGGGG
TACCAGAGGT CGTTCACCCG CTCCTTTTAC CTCAGGCCGC GCTACGTCCT CGGGCAACTG
GCCGCGATCC GCTCGCGGGA GGAACTAGGC TACTGGAGCC GGGCCGGGCT TTCTTATCTC
AAGTGGTACG CCACGGGGAA GGTTTAG
|
|---|
| Protein sequence | MSGTPAGRSA RAVDPGCVLL VRPPDPFQGA ALLSHTRPMN LAYLASTLRQ AGLQVAIADY
EATPYSEEHL AALLQRLSPA LVGFSATTPT IESAAGLARA VKRRRGEAVT VIGGSHASAL
PKETLEEFPS FDYLVRGEGE LTLAELSLRL RDGGSDQDIR GIAYRYGEGI RVNPPRELVA
DLDSLPFPAR DLLDYSPRAG HSSRGFSNAL RSGELFTSRG CPVACSFCAI QATFGRSVRF
RDPLFIADEL DRMVREQKVN HVVIADDTFT LNPERAASIC EILSRSGIRS WNCDTRVNTV
TPELLRLMRR CGCEKVAFGV ESGSPRLLEL MGKGITVGQV ERAVRWAREA GIRHVEGNFI
IGCDPSETRE DLEQTRRLIR GLPWSFVSVS VVVPYPGTPL REKMLAAGLI EPGVPWEDYV
IFGKKPRWRT ANFSAEELLG YQRSFTRSFY LRPRYVLGQL AAIRSREELG YWSRAGLSYL
KWYATGKV
|
|---|
| |