| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0662 |
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| Symbol | |
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| ID | 8135977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 794955 |
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| End bp | 797183 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644868279 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003020494 |
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| Protein GI | 253699305 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 9.47145e-25 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAGG AAAGCCAAAA CATCCGGCGC AGGACCACCT TCATCGCGCT GATCGTTTCC
GTCATGCTGA CGGTGGTCCC ACCGGCCATC TACTTCGTCA TGTCCTTTTC TCACATGAGG
GGCGTGGTGG AGGCCGAAGG GGAAATCAAC GCGCGCGTCG TTGGTTCCCT CGTGGTGGCG
AACCCGCAGA TGTGGGAGTT CGAGGAATTG CGCCTGAAGG AACTTTTGGG ACGCCGCTCC
AAGGCCGAGG TGAAGGAAGT AAGAAGGCTC TACAACCTGA AGCACGAGGT GATCGCGGAG
AGCGGGGAGC CGCTGCCGCG GCCGGTGTTC GCCATGTCCT TCCCCGTTCA CGATGCCGGG
CACGAGGTGG CCATCCTCGA GGTGTCACGC TCTTTGCTGC CGACCCTGGT CAAGACGCTC
ATGGCCCTTG TGGTGGGCGC TCTGGCGGGG GCACTCGCCT TCTTCCGGCT TAGGACCGTG
CCGCTGCGCG CCCTCGACGA GGCGTACCGG GTCCTGAAGC AGAGCGAGGA GAAGTATCGC
TCCGTGTACG AGTCGCTGAA CGAAGGGCTG GCGCTGTACC GGGCCTCCCG CCGTGAGGAC
GGCTCCGCCG ACCTGGTTTT GACCGACGTC AACCCCGCCG CCATCAACGT GTTCGGCTTC
AGCAGGGACG ACATCGGCGG CTGGATTACG GAGCTTCTAA ACGGGCTCTT CGCGGAAAGC
ACCGAGCAGA TCTTCTCGGC GCTGCAGGCC CGGGGCGAGG TGAGCCTGGA ACTGGAGCAA
AATTCCACCG GCCGCATCTT CTTGCTCACC GCGTTCCCCA TGGGGTACGG CATGGTGGCG
ACGCTGCTCG AGGACGTGAC GGAGAAGAAG AGGACCGCGG AGCAGTTGGA GCGGCTCGCC
TACTACGACA GCCTCACCGG GCTTTTGAAC CGCCGCATGC TTCTGGACCG GATGGAGCAG
GCCATCGGGA CCGCGCAGCG GGAGGGGGTG AAAGTCGCCA CCCTGTTCAT GGACCTGAAC
GGCTTCAAGG TGATCAACGA CACCCTGGGG CACAAGGCGG GGGACCAGAT CCTCATCGAG
GTGGCAAAGC GGCTGCAGAA GGTGGTGCGC AAGAGGGATA CCCTGGCGAG GCTTGGGGGG
GACGAGTTCG TGGTGGCTGC GACCTTCGAG AAGGACGACA ACGCGAGCGC CATCGCCAAG
AACCTGATCA ACGCCATCAC CCCGGTCTAC CAGGTCTGCG ACCGGGAGGT CTACGTGGGG
GCGAGCGTGG GGATCTCCAT TTTCCCCGAC GACGGGGATG TGCCCGAAAC CCTGCTGAAG
AACGCCGACA TCGCCATGTA CAACGCGAAA AGCCAGGGTC GCGGCGACTT CTGCTTCTAC
AGCGCGCAGT TGAACGAAAG GCTGCACGAA CGGATGCAAC TGGAGTTCAA GCTGAGGGGG
GCCGTGGAAC GCGAGGAATT CTTCCTCGAG TACCAGCCCA TCCTGGACAG CAAGACCGGG
CGCATCACCG CGGTGGAGGC GCTGTTGCGC TGGAACGACC CGGAAAGGGG GATGGTGATG
CCCGAGGCCT TCATCCCGCT CGCAGAGGAT ACCGGCGTCA TCCTCCCCCT TGGGGAATGG
GTGCTCCGCA CGGCCTGCGC CAAGGTCAGG CAGTGGCAGG ACGCAGGGGT CATGCCGGTG
CGGATGGCGG TGAACATCTC CGGAAAACAG TTCACCCAGG GGGACCTGTC GAAGACGGTG
GAGGAGGCCC TGCTTGAAAG CGGCGTCCAC CCCTCGTGGC TGGAGCTGGA ATTGACCGAG
ACCTGCCTGG TCAAGAACAT CGAGGATACG GTGAAAAAAC TCTGCCGCCT CAAGGGGTTG
AGCGTCTCCA TCTCCATCGA CGACTTCGGG ACCGGCTACT CCTCGCTGCA GTACCTGAAG
AACTTCCCCA TCGACCACCT GAAGATCGAC AGGGGGTTCA TCAACAACGT CTGCGAGCTC
CCCGACGACA GGGCCATCGT GGACGCCATC ATCGGCATAG CGAAGGCGAT GGATCTCCAC
GTCATCGCGG AAGGGGTCGA GACGAGGCAG CAGGCGGAGC ACCTGGTGCG GCGCGGCTGC
GACGAGTTCC AGGGGTACTA CTTCTACCGG CCGCTTTCCG AGGAGAAGCT CCTGGAGGTT
TTGGCCGGCA AAGCGGCCGC GGGCCTTCCC CCCGGCTCCG ACGCCGACTG GCTGGAACTG
CAGGCCTAG
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| Protein sequence | MTQESQNIRR RTTFIALIVS VMLTVVPPAI YFVMSFSHMR GVVEAEGEIN ARVVGSLVVA
NPQMWEFEEL RLKELLGRRS KAEVKEVRRL YNLKHEVIAE SGEPLPRPVF AMSFPVHDAG
HEVAILEVSR SLLPTLVKTL MALVVGALAG ALAFFRLRTV PLRALDEAYR VLKQSEEKYR
SVYESLNEGL ALYRASRRED GSADLVLTDV NPAAINVFGF SRDDIGGWIT ELLNGLFAES
TEQIFSALQA RGEVSLELEQ NSTGRIFLLT AFPMGYGMVA TLLEDVTEKK RTAEQLERLA
YYDSLTGLLN RRMLLDRMEQ AIGTAQREGV KVATLFMDLN GFKVINDTLG HKAGDQILIE
VAKRLQKVVR KRDTLARLGG DEFVVAATFE KDDNASAIAK NLINAITPVY QVCDREVYVG
ASVGISIFPD DGDVPETLLK NADIAMYNAK SQGRGDFCFY SAQLNERLHE RMQLEFKLRG
AVEREEFFLE YQPILDSKTG RITAVEALLR WNDPERGMVM PEAFIPLAED TGVILPLGEW
VLRTACAKVR QWQDAGVMPV RMAVNISGKQ FTQGDLSKTV EEALLESGVH PSWLELELTE
TCLVKNIEDT VKKLCRLKGL SVSISIDDFG TGYSSLQYLK NFPIDHLKID RGFINNVCEL
PDDRAIVDAI IGIAKAMDLH VIAEGVETRQ QAEHLVRRGC DEFQGYYFYR PLSEEKLLEV
LAGKAAAGLP PGSDADWLEL QA
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