Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0571 |
Symbol | |
ID | 8135886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 696389 |
End bp | 696802 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644868188 |
Product | methylmalonyl-CoA epimerase |
Protein accession | YP_003020403 |
Protein GI | 253699214 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 3.82853e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTATCTA AGATAAATCA CATCGGAGTT GCAGTCGCTT CTCTTGAGGA AGCCCTTCCT TTTTATCGCG ATTCACTGGG CATGGCTTTC TCTGGTACAG AAGAGGTCCC CAGTCAACTA GTACGTGTAG CTTTTCTGTC AGTAGGTGAA TCGAAGATTG AACTTCTGGA GCCGACCTCC CCCGACAGCC CCGTGGCCAA GTTCCTGGAG AAGAACGGCC CCGGGGTGCA CCACGTGGCT TACGGGGTCG ACGACATCGA GGCGGCCATC GCGGCGCTGG TGGCCAAGGG TACCCGCATG ATCGATGCTG TTGCCCGACC CGGCGCACAT GGTGCCCGGA TCGCATTCAT CCACCCCAAA AGCAGCGGCG GCGTACTGAC GGAACTGTGT GAAGTGCACG ACCACAGTCA TTAA
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Protein sequence | MLSKINHIGV AVASLEEALP FYRDSLGMAF SGTEEVPSQL VRVAFLSVGE SKIELLEPTS PDSPVAKFLE KNGPGVHHVA YGVDDIEAAI AALVAKGTRM IDAVARPGAH GARIAFIHPK SSGGVLTELC EVHDHSH
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