Gene GM21_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0467 
Symbol 
ID8135776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp575051 
End bp575701 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID644868085 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003020305 
Protein GI253699116 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.000507383 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATGA AGGTACTGAT CGTGGACGAC CACACCATAG TGAGGCAGGG GTTGCGCGTA 
CTGATCGACA AGGAACAGGA CATGGAGGTG ATCGCCGAGG CTGCCACCGG CGCCGAGGCG
ATCCGGATAG CCCGCGAAAA GCGCCCCGAC GTCACGGTCA TGGACATCAC CATGCCCGAC
CTAAACGGCA TCGACGCCAC GCGCGCCATC GTCGCGGAAT GGCCGCAGGC GCGGGTGCTG
GCGCTCTCCA TGGAGTCGGA CCGGCGCTTC GTGGTCGAGG TGCTGAAGGC AGGCGCCAAC
GGCTACGTCC TCAAGGACTC GGCCTTTGCC GAGCTAGCCA CCGCGATCCG GGCCGTGGCC
TCGGGGGAGA CCTATCTTCC TTCCAGGGTG ACCACGCTTT TGATCAAGGA GTACCTGCAG
CGCATTCCCG ACGAGGTGCC GGCTACCTAC GAGAACCTCT CCCTGCGGGA AAGGGAGATC
CTGCAGCTGA TCGCCGACGG CAAAAACGCG AAGGAGATCG CCTTCAGCTT CGGCGTCAGC
GTGAAGACGG TGGAGAACCA GCGGCACAGC ATCATGAAAA AGCTCGACCT GTTCAGCATC
GCCGAATTGA CCAAGTACGC AGTACGCCAG GGTCTCACCT CGCTCAACTG A
 
Protein sequence
MSMKVLIVDD HTIVRQGLRV LIDKEQDMEV IAEAATGAEA IRIAREKRPD VTVMDITMPD 
LNGIDATRAI VAEWPQARVL ALSMESDRRF VVEVLKAGAN GYVLKDSAFA ELATAIRAVA
SGETYLPSRV TTLLIKEYLQ RIPDEVPATY ENLSLREREI LQLIADGKNA KEIAFSFGVS
VKTVENQRHS IMKKLDLFSI AELTKYAVRQ GLTSLN