Gene GM21_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0394 
Symbol 
ID8135702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp466680 
End bp467555 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID644868012 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_003020233 
Protein GI253699044 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.264503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTT TTCCCCGTCT CATACTGGTC GTCCTGCTGC TGATTACTGT TTTGGCCCAC 
CCCTGCCTTG CCGGGTCGAA GCCGGTGGTC TTCTTCGGAA CCAACCTCCG ATACAGCCCG
AGGACCATGT ACGCCCGCTA CCAGCCGCTC ATGGATTACC TCACCGAGAA CACCCCCTAC
CGGTTCGAGC TACTGATCAG CCGTGACTAC CGCCAAGCCG TGAACGACCT GAAAGAAGGG
CGGGTGCTGA TCAGCTCCCT CGGGGACGGC GCCTTTGTCG ATGCGATGCT GCTTTACGGC
GCGGTCCCGA TCGTCAAGCC CTTGAACCAG GAGGGGAAGC CCTTTTACCG GGCGGCGATC
GTGGTGCCTC GCAATTCCCC CGCCCTGCGC ATCAAGGACC TCAAGAACAA ACGCTTTGCC
TTTGGCTCCC ACCATTCCAT CACCGGAAAC CTGCTGCCCC GTTACATGCT GGAGCGGGGA
GGGGTGAGCG TTTCCGGGCT GGAATACCAG GTGAGCCTGA AAAACCACGA TGCGGTTACC
AAGGCCATCC TCAAAGGGCA GTACGACGCC GGGTCGGTGA AGGAGGTCTT CGCCGGCAGG
TATTGGCAGT ACGGGCTGCG GGTGCTGGCG TTTTCCGATC CCATCCCGTC GGTGCCGCTG
GTGGTGCACC CCGACATCCC GCCGCCGATA CGGCGGGCGG TCACCGCAGC CCTCCTGAAG
CTGGACCGGC GCAACCCCGC GCATCGGGAG ATCATGTCGC GGTGGGACGA CGAGTTCCGG
TACGGTTTCG CCCCGGCGTC GCCCGCTGAC TACCGCGAGC AGATCTGGAT GTTCCAGTCC
ATCCCCTTCG GCTGCGGGGC GAGGTGTCAC CAATGA
 
Protein sequence
MPRFPRLILV VLLLITVLAH PCLAGSKPVV FFGTNLRYSP RTMYARYQPL MDYLTENTPY 
RFELLISRDY RQAVNDLKEG RVLISSLGDG AFVDAMLLYG AVPIVKPLNQ EGKPFYRAAI
VVPRNSPALR IKDLKNKRFA FGSHHSITGN LLPRYMLERG GVSVSGLEYQ VSLKNHDAVT
KAILKGQYDA GSVKEVFAGR YWQYGLRVLA FSDPIPSVPL VVHPDIPPPI RRAVTAALLK
LDRRNPAHRE IMSRWDDEFR YGFAPASPAD YREQIWMFQS IPFGCGARCH Q