Gene GM21_0361 details

Gene Information

• Locus tag: GM21_0361
• ID: 8135668
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 435895
• End bp: 437838
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644867978
• Product: PAS/PAC sensor hybrid histidine kinase
• Protein accession: YP_003020200
• Protein GI: 253699011
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 47
• Fosmid unclonability p-value: 0.00025473
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGATGAGA TCCGTGACAA CCATAGCTTC GCCTTTTTGG AGCAGAAGGT CGAGGAGCGA 
ACCCGCGAAT TGAAACAGGA GATCCAGGAG CGCCTGCGGG CCGAAGGGCA ACTGGCCGAG 
GCGCGGGACC ACTACCTGAA CATCCTGGCC GAGGCCCCCG CGCTGATCTG GCGTGCGGAC 
ACGCAGGCCA AGTGCGACTG GTTCAACAAC ACCTGGCTTT CTTTTACCGG CCGCACCATG 
GAAGAGGAAT ACGGCGACGG CTGGGCGCAG GGGGTCCACA CCGACGACCT GGAGCGCTGC 
GTTGCCATCT GGCTCGGGGC GTTTCACCGG AAGGTCCCGT TCGAAATGGA GTACCGGCTG 
CGACGCCACG ATGGCGTATT CCGCTGGATC CTGGACATCG GCCGCCCCTT CTCCGGGCTC 
GACGGCAGCT TCGCCGGGTA TATCGGTTAC TGCTTCGACA TCACCGACCG CAAGGGGGCG 
GAGATGGAGC TGATAGTGGC AAGGGAGGCC GCCGAGGCTG CCAGTAAAGC GAAGACCGAG 
TTCCTGGCCA ACATGAGCCA CGAGATCCGC ACCCCGATGA ACAGCATCAT CGGGATGACG 
CAGCTATTGG CCTACACGGA GCTTTCAGCC GAGCAGAAGG AGTACGTCGA CGGAATCCTC 
ACCTCTTCGG AGGGGCTCCT TGCCATCATC AACGACATTC TCGATCTTTC GAAAGTGGAG 
GCAGGGAAGA TAGAACTGGA GTCGCGGAAT TTCAGCCTCA GACAGAACAT CAACGAAATC 
ATCAGGACCC AGACGGCGGC GGCCCACGAA AAGGGGCTCC AACTTAAAGT CTTCATCCCG 
GAAGAGATAC CAGACGCACT GGTCGGCGAT CGGCTGAGGC TAAAGCAGGT GCTACTCAAC 
ACAATCGGCA ACGCCATCAA GTTCACCGCA AGCGGGAGCA TTGCCGTAAC GGTAGCGCTG 
GCGGAAAAAC AAGAGGACGC GGCTCGCCTT ACATTCAGCA TCGCCGATAC CGGCATCGGG 
ATAGCGCCGG AGTCCCTGGA CCGCATTTTC GCGCCTTTCG CGCAGGAAGA CACCTCCACC 
ACCAGGAGGT ACGGCGGCAC CGGTCTTGGG CTTTCCATCA GCACGAAGCT GGTCCGGCTC 
ATGGGGGGAC GGATCTGGGC GGAAAGCCGC AAGAACACCG GCAGCACCTT CCACTTTGAG 
ATTCCCTTCC GGCTCTGCGC CAAGAAGGCC CGGCCCAAGG CGTCCTTAAA TACCGCAAGG 
AAAGTCGTTT GGGACGGGGC CAAGCTCCGC ATCCTGCTGG CCGACGACCA GGAGATGAAC 
CGCAACATCA TGGAGAAACT CCTGGGGCGG CTGGGGCACG AACTGGAGAG TGCTGCGGAT 
GGCGGCGAGG CGCTGGCAAA ATGGGAAAAG GGGGACTTCG ACCTCATCCT CATGGATGTC 
GAGATGCCTG GTATCGACGG CACGGAAGCG ACCCGCGTGA TCCGGGAGAC CGAGACCCCG 
CTGGGAAAGC GGACCCCCAT CATCGCCCTC ACCGCCCATG CGCTTAAGAA CCACCAGGAG 
ATGCTCCTCC GAGTAGGCTA CGACGGGTAC GTACCCAAAC CCGTGGAGAT GTCCACGCTG 
TTACGGGAGA TGAGGCGCTG CTTGCGCCTG CCCGAGCTTG ACACAGCAGG CACAAGCGAA 
GCTGTCGACG GAGTCCCCAC GACTCCCGCG GCAAACCAGC CTGGCATAGT GGACAGGCAG 
CAACTTGCAG ATATACTCAG TTCAATCAGT TCGCTGTTGC GGCAAAGGAA CATGAAGGTC 
CTGGACCAAG TAAACGACCT CTCCGCACTG ATTCCCGGGT CACCTCTTCT AGAACAGTTA 
AACCAGCAGA TACGGCATTT TGATTGCCAA AGCGCACTAA ATACAGTCAG AGAAATCCTT 
CTAGATTACG ACATCCACTC CTGA 

 

Protein sequence

MDEIRDNHSF AFLEQKVEER TRELKQEIQE RLRAEGQLAE ARDHYLNILA EAPALIWRAD 
TQAKCDWFNN TWLSFTGRTM EEEYGDGWAQ GVHTDDLERC VAIWLGAFHR KVPFEMEYRL 
RRHDGVFRWI LDIGRPFSGL DGSFAGYIGY CFDITDRKGA EMELIVAREA AEAASKAKTE 
FLANMSHEIR TPMNSIIGMT QLLAYTELSA EQKEYVDGIL TSSEGLLAII NDILDLSKVE 
AGKIELESRN FSLRQNINEI IRTQTAAAHE KGLQLKVFIP EEIPDALVGD RLRLKQVLLN 
TIGNAIKFTA SGSIAVTVAL AEKQEDAARL TFSIADTGIG IAPESLDRIF APFAQEDTST 
TRRYGGTGLG LSISTKLVRL MGGRIWAESR KNTGSTFHFE IPFRLCAKKA RPKASLNTAR 
KVVWDGAKLR ILLADDQEMN RNIMEKLLGR LGHELESAAD GGEALAKWEK GDFDLILMDV 
EMPGIDGTEA TRVIRETETP LGKRTPIIAL TAHALKNHQE MLLRVGYDGY VPKPVEMSTL 
LREMRRCLRL PELDTAGTSE AVDGVPTTPA ANQPGIVDRQ QLADILSSIS SLLRQRNMKV 
LDQVNDLSAL IPGSPLLEQL NQQIRHFDCQ SALNTVREIL LDYDIHS