| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0228 |
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| Symbol | |
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| ID | 8135534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 271231 |
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| End bp | 272604 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644867849 |
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| Product | protease Do |
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| Protein accession | YP_003020071 |
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| Protein GI | 253698882 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG CAATCGTAGC AAGATTTCTG GTACTTAGCG TATTTCTCTC CTCCATTTTC
TCGACCGTCG CGGGCGCCTC GGTGCTCACT CCGGACTTCG CCAAGCTGGC GAAGAAGCTG
AAGCCCGCTG TGGTCAACAT CAGCACCTCG AAGACCATAG CGGTGAAAAA GCGGCAGATC
GCCCCCGGAC GCGACCCCTT CCAGGAATAT TTCGAGAAGT TTTTCGAGGG GCCTCACCAG
CGTCCGCAAA AGCAGAGGAA CCTCGGCACC GGTTTCATCA TCAGCGACGA CGGCTACATC
ATCACCAACA ACCACGTGGT GAAGGATGCC GACGAGATCA AGGTGAAGCT CTCCGATGGC
AGGGAGTTCG CGGGGGATGT GAAGGGGCGC GACGAAAAGC TGGACCTTGC CCTGGTGAAG
ATCGACGCCA AGGGTCACCT TCCCGTGGCG CCTTTGGGGG ACAGCGACAA GATGGAAGTG
GGGGACTGGG TGATGGCGAT AGGCAACCCC TTCGGGCTCT CCCAGACCGT GACGGCGGGG
ATCATCAGCG CCCAGGGGCG CGTGATCGGT TCCGGCCCGT ATGACGACTT CATCCAGACC
GACGCCTCCA TCAACCCCGG CAACTCAGGG GGGCCGCTAT TCAACACCGA AGGGGAGGTG
ATCGGCATCA ACACTGCGAT CGTCGCCGGC GGCCAGGGAA TAGGGTTTGC CATACCGGTC
AACATGGCGA AGGAGATCCT CCCGCAGCTG AAGTCGGCCG GCAAGGTGAC ACGCGGTTGG
CTGGGCGTAT CGGTGCAGTT GGTGACCCCG GACCTCGCCA AATCCTTCGG GCTTGACAGC
GAGAAGGGGG CGCTGGTGGC CGACGTGGTG AAAGAGAGCC CCGCGGAGAA GGCCGGCCTC
AAGGGGGGCG ACATCATCCT CGAGTACGAC GGGCATCCCA TCAAGGAGAT GGGGGAGCTT
CCGCGCCGCG TGGCCGCCAC CCCGGTAGGA AAGAAGGTGA AACTGGTGGT GCAGCGCGAG
GGGCGTCAGG AGACGTTGCA GGTGACCGTC GAGCAGTTGA AGGACGACGA CCAGGATAGC
GCGGTCGCCA GCGACCGGCT CGGGGTGAAG GTGACGGAGC TTACCCCGGA GCGCGCGCAG
CAGTTGCGGG TGCAGGGGGA CAAAGGGGTC GTGGTGACCG ATGTGGAGCC GGACAGCCTT
GCCGACCGCG CCGGCATCCA GGAGGGAGAC CTGATCAGGG AGATCAACGG AGTGCGCGTA
AGCGGTGTGA GCGATTACAG CAAGTTGATC GCGGCGGCGA AGAAGGGGGG GTATCTGAAG
ATGCTGCTGA GGCGCGGCGA CGCCTCCCTG TTCGTGGCGC TCAGGCTCGA ATAG
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| Protein sequence | MQAAIVARFL VLSVFLSSIF STVAGASVLT PDFAKLAKKL KPAVVNISTS KTIAVKKRQI
APGRDPFQEY FEKFFEGPHQ RPQKQRNLGT GFIISDDGYI ITNNHVVKDA DEIKVKLSDG
REFAGDVKGR DEKLDLALVK IDAKGHLPVA PLGDSDKMEV GDWVMAIGNP FGLSQTVTAG
IISAQGRVIG SGPYDDFIQT DASINPGNSG GPLFNTEGEV IGINTAIVAG GQGIGFAIPV
NMAKEILPQL KSAGKVTRGW LGVSVQLVTP DLAKSFGLDS EKGALVADVV KESPAEKAGL
KGGDIILEYD GHPIKEMGEL PRRVAATPVG KKVKLVVQRE GRQETLQVTV EQLKDDDQDS
AVASDRLGVK VTELTPERAQ QLRVQGDKGV VVTDVEPDSL ADRAGIQEGD LIREINGVRV
SGVSDYSKLI AAAKKGGYLK MLLRRGDASL FVALRLE
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