Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0205 |
Symbol | |
ID | 8135510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 245236 |
End bp | 246627 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644867825 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003020048 |
Protein GI | 253698859 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0000000146418 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCATCC TCGACCATGA CAGCAAGCTG CCGCTGTACA CCCAACTCTA TGATCAGATG AAAGCGAGCG TCCTCTCCGG GAAGCTGTCA TCTCACTCAA AGCTGCTCTC GGTCCGGGAG TTGGCCGCCG AACTCTCCAT CAGCCGCAAC ACCGTTGAAA ACGCCTACCT TGAGCTTTAC GCGGAAGGTT ACATCTACAG CAAACCGCGC AGCGGGTATT TCGTTTCGGC ACTGACGCCG GATCTCTTCA GTTTGCCGTC GCCACGAAAA AAGCTGCTGC GCCCCCCCCT CACCGAGCCG AAGCCTAAGG GGAGCATCGA CTTCCATCCG GCGCGGCTCG ACCCGGACGC CTTTCCCGCA TCCCTTTGGC GCAGCTGCTA CCTGGAGTCG TTGCGGCAGT GTCGCGGTGC ACTGGTACAG TACGGCGACC CGCAGGGGGA GTGGGAGCTA CGGTGCGGCA TCGGGCGCTA CCTGGAGCGG TCACGCGGAG TGGCCTGCGC CCCGGAGCAG ATCGTCATCT GTTCCGGGCT CCAGCAAAGC CTCGGCATCG TGGCGCAGAT CCATAACGAG CGGCGTCCGG CGGTAGCACT AGAAAATCCC GGTTTCCATC TCCCCAGGTC CGTTTTTCAA AACCATGGCT TCGAGACAGT TCCCATACCT GTCGGCTCCG GCGGCCTCGA CCTCGACGCC CTGGCATCAA GCAACGCCAC CATCGTGTAC GTGACGCCCT CCCATCAGTT CCCTACCGGC TGTGTAATGC CCATTGCGAA CCGGCTCAAA CTGATCGAAT GGGGCACTTC AGGCGACCGC TTGATCATAG AGGACGATTA CGACAGCGAG CTCCGCTACC ACGGCAAGCC GATCCCCTCG CTGCAGGGGC TGCACCCCGA CGGGAACATC GTCTACCTTG GAACCTTTTC CAAGGTGCTG TCGCCGGCCT TGCGCGTCAG TTACCTGGTA CTCCCTTACC CGCTTATATC CAGCTATCGG CAGCTTTTCC GCGACTACGC CTGCTCCGTC TCCCTGTTGG AGCAGGCGAC CCTTGCGCGG TTCATGGAGC AGGGGCACTG GGACCGGCAC CTGCGGCGGA TGCGCACTCT CTACCAAAAG AAGCACGATG CCATGCTGAG GGCGGTCGAG ATCCGTTTCG GATCCAAAGC CCTTGTACTC GGACAGGGTG CGGGACTGCA CATGGTGCTG GAACTCTCCG GGCACGACCT AAGCGAAACG GAACTCATCT CCCGAGCCAG AAGCAAGGGG ATCGAGCTGT TTCCCTATTC CGCCACCCTT GCCGAAGACG GCAGTTGCAG CAGGGTCGTC TTGGGCTTTG GCGGCCTGAA GCCGGACGTC ATAGACCGGG GGGTCGAACT GTTGTCCCAG GCATGGTACT GA
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Protein sequence | MFILDHDSKL PLYTQLYDQM KASVLSGKLS SHSKLLSVRE LAAELSISRN TVENAYLELY AEGYIYSKPR SGYFVSALTP DLFSLPSPRK KLLRPPLTEP KPKGSIDFHP ARLDPDAFPA SLWRSCYLES LRQCRGALVQ YGDPQGEWEL RCGIGRYLER SRGVACAPEQ IVICSGLQQS LGIVAQIHNE RRPAVALENP GFHLPRSVFQ NHGFETVPIP VGSGGLDLDA LASSNATIVY VTPSHQFPTG CVMPIANRLK LIEWGTSGDR LIIEDDYDSE LRYHGKPIPS LQGLHPDGNI VYLGTFSKVL SPALRVSYLV LPYPLISSYR QLFRDYACSV SLLEQATLAR FMEQGHWDRH LRRMRTLYQK KHDAMLRAVE IRFGSKALVL GQGAGLHMVL ELSGHDLSET ELISRARSKG IELFPYSATL AEDGSCSRVV LGFGGLKPDV IDRGVELLSQ AWY
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