| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0177 |
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| Symbol | |
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| ID | 8135480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 213365 |
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| End bp | 214084 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644867796 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003020020 |
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| Protein GI | 253698831 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000000000012846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGGTA AAGCCAAACT GCTTCTTGCG GTTGCCGCCT TGAACCTGGC GCTGGCAAAG
GATGCATCCG CCTTCTGTTT CGAAGAGGCG GGCCAGCAAT ACGGCATCAA TCCGCAGATC
CTACGCGCCA TAGCCAAGGT CGAATCCAAT TTCAACCCCG CCGCCGTCAA CTACAACACC
AACGGTTCCT ACGATTTCGG GCTGATGCAG ATCAACACCA TCTGGGCTCC CACCATCGGC
AAGGAACGCT GGAACTCTCT GGGCGACCCG TGCAACAGCG TGAAGACCGG GGCCTGGATA
CTTTCCATGT GCATGGAGAA GTACGGCTAC ACCTGGAAGG CCATCGGCTG CTACAACAGT
CAGACCCCCA ACAAGCGCGA CAAGTATTCC AAAAAGGTGT TCGACCAGTT GCAGCGCGTG
AAGCCGTTGA AGCAGGAAGC GGCCTATACG CCGCTCAACA GGAGGATCGA GGACCTGGTA
CGGGACAAGG TTGAGGGGTG GGTCGACGAT GCCGCCCAGG GAAAAGGGGA TGAATTCACC
GTGAAGGTGA AAGGGCCGAT CCCATCCCCG AAAGAGGTGC TGAAAGAGGA AACTCCTTCC
TTGGCGGACT CGTCGCTGCG AAGCGCGCTC CCCGGCAACA TCCAGCAGAA CTCGCTGGCC
CCCGGTACCG GTGACCCCGG CATGGAACAG GGGGACACCG CAGCATCCCC CATCCCGTAG
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| Protein sequence | MTGKAKLLLA VAALNLALAK DASAFCFEEA GQQYGINPQI LRAIAKVESN FNPAAVNYNT
NGSYDFGLMQ INTIWAPTIG KERWNSLGDP CNSVKTGAWI LSMCMEKYGY TWKAIGCYNS
QTPNKRDKYS KKVFDQLQRV KPLKQEAAYT PLNRRIEDLV RDKVEGWVDD AAQGKGDEFT
VKVKGPIPSP KEVLKEETPS LADSSLRSAL PGNIQQNSLA PGTGDPGMEQ GDTAASPIP
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