Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0088 |
Symbol | |
ID | 8135387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 111478 |
End bp | 112032 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644867705 |
Product | 2'-5' RNA ligase |
Protein accession | YP_003019933 |
Protein GI | 253698744 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.000000000000385137 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCCAAGAC TCTTCGTCGC CATCGATCTG CCGGAAGAAA TAAAAGCCTC TCTCTCACAG CTTTCCTGTG CTGTGCCAGG TGCCCGATGG GTTGACCCTT CCCAAATCCA TCTCACCTTA CGCTTCATAG GAGACGTCGA CCCTCAGACA GTTTCCAGAA TAAAGAAGGT CCTGTCAGTT GTGCAGTTCG CCCCTTTTCC CCTCAGCGTA GCCGGGGTCG GCCACTTCCC CCCGCGCGGG TTCCCCCGCG TCCTTTGGGT CGGGGTGGAA CCGCGCCCCG AACTCATGGC CCTGCAGCAG CGGATCGAAT CGGCGCTGCA ACGGGCAGGG GTTTCTCCGG AAGAGCGCCC CTTCTCCCCG CACATAACGC TCGCCCGCCT GAAAGAGACC CCCCCCGCCG CGGTCGCCGC CTTAGAGTCG TCGCACCGAG GACTCGCCTA CCCACCTTTC CCCGCCACGC AGTACGTACT CTACTCCAGC GTCCTCACGC CCAAAGGCGC CATCCACCGC AAGGAAGAGA TCTTTCGCTT GAGCGAAGAA GCGCCTTTAC GCTAA
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Protein sequence | MPRLFVAIDL PEEIKASLSQ LSCAVPGARW VDPSQIHLTL RFIGDVDPQT VSRIKKVLSV VQFAPFPLSV AGVGHFPPRG FPRVLWVGVE PRPELMALQQ RIESALQRAG VSPEERPFSP HITLARLKET PPAAVAALES SHRGLAYPPF PATQYVLYSS VLTPKGAIHR KEEIFRLSEE APLR
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