Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0013 |
Symbol | |
ID | 8135312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 20758 |
End bp | 21513 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644867630 |
Product | ABC-2 type transporter |
Protein accession | YP_003019858 |
Protein GI | 253698669 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAG GCGCGTTTTC CATCTGGGGC AGGGACATGA TGGTGCTGAG GCGGAGCATC TTTTCCGAAC TGGTCGCCGT CATCGCCTAC CCCCTCACCC TCTACCTCGC CTTCGGCTTC GGCCTCAAGG GGTACATCAC CGACGTGAAC GGCGTCCCCT ACCCGCTCTT CATAGCGCCC GGCCTCATCT CCATGACGGC GATCAACGCC GCCTTCGACG AAAGCTCCTG GAGCATGTGG TTCCACCGCC GGGTGCAGCG CACCATCGAG GAGTACCGGG TCACCCCAAT CACGGTCTAT GACATCGTCA TCGGAAAGAT CTTGTCCGGT TTCTCCCAGG GGGCCGTCAA AGGCTCCGTG GTATTCCTGG TGATCCTCCT CTTTACCCCC TTCCGCATCG ACTACAGCCA CCTCCCCGTC TACCTGATGT GCATCGCCAT CTCGTCCATG ACCTTCTCCT GCCTGGGAAC CATCTGCGGC ACGGTGATCG ACAAGCCGGA GAATATCGGG CGTGTGCAGT CGGTGGTCAT CGTCCCTCTC ATCTTCATGG CCGGCATTTT CTTCCCCCTT TCCTCCTATC CCGCTTCCAT CCGCCCCTTC ATCGAACTCC TCCCCACGAC GGCGGTCTTC GAAGGGGCGC GGGATGCGCT CTTGCAGGGA TCCGTCCCCG CACCCTACCT GCTGAATCTC GTAGCCACCG CGGCAGTATC CTTCCTGGTG GCGGTCTACA CCTTCGACCG AAAGATGGCG GAATGA
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Protein sequence | MFKGAFSIWG RDMMVLRRSI FSELVAVIAY PLTLYLAFGF GLKGYITDVN GVPYPLFIAP GLISMTAINA AFDESSWSMW FHRRVQRTIE EYRVTPITVY DIVIGKILSG FSQGAVKGSV VFLVILLFTP FRIDYSHLPV YLMCIAISSM TFSCLGTICG TVIDKPENIG RVQSVVIVPL IFMAGIFFPL SSYPASIRPF IELLPTTAVF EGARDALLQG SVPAPYLLNL VATAAVSFLV AVYTFDRKMA E
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