Gene GM21_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0013 
Symbol 
ID8135312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp20758 
End bp21513 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID644867630 
ProductABC-2 type transporter 
Protein accessionYP_003019858 
Protein GI253698669 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR01291] ABC-2 type transporter, NodJ family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAG GCGCGTTTTC CATCTGGGGC AGGGACATGA TGGTGCTGAG GCGGAGCATC 
TTTTCCGAAC TGGTCGCCGT CATCGCCTAC CCCCTCACCC TCTACCTCGC CTTCGGCTTC
GGCCTCAAGG GGTACATCAC CGACGTGAAC GGCGTCCCCT ACCCGCTCTT CATAGCGCCC
GGCCTCATCT CCATGACGGC GATCAACGCC GCCTTCGACG AAAGCTCCTG GAGCATGTGG
TTCCACCGCC GGGTGCAGCG CACCATCGAG GAGTACCGGG TCACCCCAAT CACGGTCTAT
GACATCGTCA TCGGAAAGAT CTTGTCCGGT TTCTCCCAGG GGGCCGTCAA AGGCTCCGTG
GTATTCCTGG TGATCCTCCT CTTTACCCCC TTCCGCATCG ACTACAGCCA CCTCCCCGTC
TACCTGATGT GCATCGCCAT CTCGTCCATG ACCTTCTCCT GCCTGGGAAC CATCTGCGGC
ACGGTGATCG ACAAGCCGGA GAATATCGGG CGTGTGCAGT CGGTGGTCAT CGTCCCTCTC
ATCTTCATGG CCGGCATTTT CTTCCCCCTT TCCTCCTATC CCGCTTCCAT CCGCCCCTTC
ATCGAACTCC TCCCCACGAC GGCGGTCTTC GAAGGGGCGC GGGATGCGCT CTTGCAGGGA
TCCGTCCCCG CACCCTACCT GCTGAATCTC GTAGCCACCG CGGCAGTATC CTTCCTGGTG
GCGGTCTACA CCTTCGACCG AAAGATGGCG GAATGA
 
Protein sequence
MFKGAFSIWG RDMMVLRRSI FSELVAVIAY PLTLYLAFGF GLKGYITDVN GVPYPLFIAP 
GLISMTAINA AFDESSWSMW FHRRVQRTIE EYRVTPITVY DIVIGKILSG FSQGAVKGSV
VFLVILLFTP FRIDYSHLPV YLMCIAISSM TFSCLGTICG TVIDKPENIG RVQSVVIVPL
IFMAGIFFPL SSYPASIRPF IELLPTTAVF EGARDALLQG SVPAPYLLNL VATAAVSFLV
AVYTFDRKMA E