Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0004 |
Symbol | |
ID | 8135303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4052 |
End bp | 6442 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644867621 |
Product | DNA gyrase, B subunit |
Protein accession | YP_003019849 |
Protein GI | 253698660 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 0.783567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAG AAGAACAGGG CGATTACGGG GCAGATAAGA TCCAGATACT GGAAGGACTG GAAGCGGTAC GAAAACGTCC GGCCATGTAC ATCGGTTCCA CAGCCGCTCA GGGTTTGCAT CACCTGGTGT ACGAACTGGT GGACAACGCG ATCGACGAGG CGCTGGCCGG CTATTGCGAC GCGGTCCAGG TCATCATCCA TTTGGACGGC TCGGTGACGG TCGAGGACAA CGGCCGCGGC ATACCGACCG ACATGCACCC GACCGAGGGA AGGTCGGCTG CGGAGGTCGT CCTTACCGTC TTGCACGCCG GCGGCAAGTT CGACAACTCC TCCTACAAGG TCTCGGGCGG CCTGCACGGC GTCGGCAGTT CCGTCGTCAA CGCGCTTTCC ACCCGGCTCG ACCTGGAGAT CCGCAGAAAC GGGCACGTCT ACACCCAGAC CTACAGAAAA GGTGTGCCGC AGGCGCCGCT GGAGATAACC GGCGAGACCA AGAGGCGCGG CACCAAGATC ACCTTCTTTC CGGACGGCGA AATATTCGAG ACCACTGAGT TTTCCTTCGA CGTCCTCTCC AAGAGGCTCA GGGAGCTCGC CTTCCTGAAC GCAGGAGTAC GGATAAAGAT CCACGACGAA CGGTTCGATA AGGATCACGA CTTCTTCTAC GAGGGGGGGA TCCGGAGCTT CGTCGAGTAC CTCAACAAGA ACAAGAACCT GGTAAACCCT GAGCCGATCT ACATCAGGGG GGAGAAGAGC GGCGTCGATA TCGAGATCGC CATGCAGTAC AACGACTCCT ACGACGAAAA GGTTTTCTCC TTCGCCAACA ACATCAACAC CCACGAAGGC GGAACGCACC TGATCGGCTT CAAGGCCGCG CTCACGCGCA CCATGAACAC CTACGCCAAC ACCAACAACC TCTTGAAGAA CGTGAAGGTG GCGATTTCCG GCGAGGACCT GAGGGAGGGG CTTACCGCCG TCATCTCCGT CAAGATCTCC CAGCCGCAGT TCGAGGGGCA GACCAAGACC AAGCTGGGGA ACTCGGAGGT GAAGGGTTAC GTCGAGACCC TCATGAACGA GAAGCTCGCC ACCTATCTGG AAGAAAACCC CGCCATGGCC AGGAAGATCC TGGAGAAGTC GATCGATGCG GCTCGTGCCC GCGAGGCTGC AAGGAAGGCG CGCGAACTGA CCCGCCGCAA AGGCGCGCTC GAGGTGGGGA CGCTGCCGGG GAAACTCGCG GACTGCCAGG AGAAGGACCC GGCGCTTTGC GAACTGTTCC TGGTCGAGGG CGACTCCGCT GGCGGCTCCG CCAAGCAGGG GCGCGACAGG AAGTACCAGG CGATCCTCCC CTTGAAGGGG AAGATCCTCA ACGTCGAGAA GGCGCGCTTC GACAAGATGC TCGCCTCCCA GGAGATCAGG ACCCTGATCT CGGCCCTTGG CACCAGCATC GGCAAGGAAG ACTTCGACAT AGCGAAGCTC CGTTACCACC GCATCATCGT CATGACCGAT GCGGACGTCG ACGGCTCGCA CATCCTCACC CTGCTTCTGA CCTTCTTCTT CCGCCAGATG CTGGAGCTCA TCGAGCGCGG CTACCTCTAC ATCGCGCAGC CCCCTTTGTA CAAGATCAAG CGCGGCAGGA AAGAGCAGTA CCTCAAGAAC GAGGCGGCCC TGCAGGCCTA CCTCCTCGAG GAAGGGACCG AGGAAATGAC GCTGAAACTA GGCGTTGGGA GCGACGAGCG GGTCTACCGC GGCAAGCAGA TCATCCCCAT ACTGACCCAG CTGATCGACT ACAACGAACT GTTCGACAAG GTGGTCAAGA AGGGGATCAA CGACGAACTC CTGAGCGTGT TCCTGAAGAC CGGCATCAAA CCGGGCCTGG AAGAGATGGC CGACCTGATC GCCCTCTTGC CGAAGATGAA GGAGGCCTTC CCCGAGGTAA CCACCGAGGA GTTCGGCGAC AGCATCATCT TCGCTTTCGG CAACCTGAGG GTGAAGATAG ACCACCAGAT CTTCACGGTG CTCGAGTCCT ACGAGTACGG CATGCTGCTG GAGAGCCACA AGCGGATGCG TTCGGTCATG GGGACAGGCA CAGGCGTCGT CCTGGGCGCC GAAGACAAGG TGGTGCTCGA GACCGAAAGC CAGGAGGATA TCCTCTCCTT CTTCATGGAG AGCGCCAAGA AGGGGCTCTA CATCCAGCGC TACAAAGGTC TCGGCGAGAT GAACCCCGAG CAGCTCTGGG AGACCACCAT GCACCAGGAG AACAGGGTGC TTCTGCAGGT GAAGATCGAG GACGCGGTGG CGGCCGAGGA GATCTTCACC GTGCTCATGG GGGACCAGGT CGAGCCGCGG CGCGATTTCA TCGAGCAGAA CGCGCTGAAC GTCTCCAACC TGGATATCTA A
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Protein sequence | MNSEEQGDYG ADKIQILEGL EAVRKRPAMY IGSTAAQGLH HLVYELVDNA IDEALAGYCD AVQVIIHLDG SVTVEDNGRG IPTDMHPTEG RSAAEVVLTV LHAGGKFDNS SYKVSGGLHG VGSSVVNALS TRLDLEIRRN GHVYTQTYRK GVPQAPLEIT GETKRRGTKI TFFPDGEIFE TTEFSFDVLS KRLRELAFLN AGVRIKIHDE RFDKDHDFFY EGGIRSFVEY LNKNKNLVNP EPIYIRGEKS GVDIEIAMQY NDSYDEKVFS FANNINTHEG GTHLIGFKAA LTRTMNTYAN TNNLLKNVKV AISGEDLREG LTAVISVKIS QPQFEGQTKT KLGNSEVKGY VETLMNEKLA TYLEENPAMA RKILEKSIDA ARAREAARKA RELTRRKGAL EVGTLPGKLA DCQEKDPALC ELFLVEGDSA GGSAKQGRDR KYQAILPLKG KILNVEKARF DKMLASQEIR TLISALGTSI GKEDFDIAKL RYHRIIVMTD ADVDGSHILT LLLTFFFRQM LELIERGYLY IAQPPLYKIK RGRKEQYLKN EAALQAYLLE EGTEEMTLKL GVGSDERVYR GKQIIPILTQ LIDYNELFDK VVKKGINDEL LSVFLKTGIK PGLEEMADLI ALLPKMKEAF PEVTTEEFGD SIIFAFGNLR VKIDHQIFTV LESYEYGMLL ESHKRMRSVM GTGTGVVLGA EDKVVLETES QEDILSFFME SAKKGLYIQR YKGLGEMNPE QLWETTMHQE NRVLLQVKIE DAVAAEEIFT VLMGDQVEPR RDFIEQNALN VSNLDI
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