Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GBAA_5334 |
Symbol | vacB |
ID | 2818515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus anthracis str. 'Ames Ancestor' |
Kingdom | Bacteria |
Replicon accession | NC_007530 |
Strand | - |
Start bp | 4835706 |
End bp | 4838132 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637792009 |
Product | ribonuclease R |
Protein accession | YP_021992 |
Protein GI | 47778388 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000223572 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGAAA TCATACAAGA ACATATTGAT AAGTTGTTAT TATTTATGAG AGAAGAAGCG TATAAACCGC TAACGATACA AGAGTTAGAA GAGGCATTTG GGATTGAAGG TTCCGAGGGC TTTAAAGATT TCGTAAAGGC ACTTGTAACG ATGGAAGAAA AGGGACTCGT TATTCGTACT CGTAGCAACC GTTACGGTCT TCCTGAAAAG ATGAATTTAA TACGTGGTAA GTTAATTGGA CATGCACGTG GTTTTGCATT TGTTGTACCA GACGAGAAGA AAACGGGAGA CGATGATCTT TTCATCCCAC CTACAGAATT AAACGGTGCG CTTCATGGTG ATACAGTATT AGCACGCCTT AGTTCCCAAT CGAGTGGTTC GCGTCAAGAA GGTTCTATTG TACGCATTTT AGAACGTGGA ACGAAAGAAC TAGTTGGTAC ATATACAGAA TCGAAAAACT TTGGATTTGT TATACCTGAC AATAAGCGCT GGACGAGTGA CATTTTCGTA TTGAAAAGTG CATCAATGGG TGCTGTAGAA GGTCATAAAG TAGTTGTGAA AATTACGAGC TATCCAGAGA ATCGTTTAAG TGCAGAAGGT GAAGTTATTC AAATTCTAGG TCATAAAAAT GACCCAGGAG TAGATATTTT ATCTGTTATT CATAAACATC ATTTACCTTT AGCATTCCCA GAGGAAGTGA TGGAACACGC AAACAGTGTA CCAGAAACGA TTTCAGAGGA AGATTTAAAA GATCGCCGTG ACCTGCGTGA CCAAATGATC GTAACAATTG ACGGTGCAGA CGCAAAAGAT TTAGATGACG CTGTTACAGT AACAAAGCTT GAGAACGGTA ACTATAAACT TGGCGTTCAT ATTGCGGATG TAAGTCATTA CGTTCAAGAA GGTTCTCCAA TTGATGTAGA AGCAGCGGAG AGAGCGACGA GTGTATATCT TGTTGACCGT GTAATTCCAA TGATCCCGCA TCGTCTATCT AACGGTATTT GTTCATTAAA TCCGAAAGTA GACCGTCTGA CGTTATCTTG TGAAATGGAA ATTAACAATT TAGGTGACGT TGTAAAACAC GAGATTTTCC AAAGTGTGAT TAAAACGACA GAGCGTATGA CGTATGCTGA CGTAAGAAGC ATTTTAGAAG ATGAGGACGA AGAATTAATG AAACGCTATG AGCCGCTCGT ACCGATGTTT AAAGAGATGG GGCAATTAGC ACAAATTTTA CGTGAAAAAC GTATGCGCCG CGGGGCAATC GACTTTGACT TTAAAGAAGC GAAAGTATTA GTAGATGAAG AAGGAAAACC GACAGATGTT GTTATGCGTG ATCGTTCTGT ATCAGAGAAG TTAATTGAAG AATTTATGCT TGTTGCAAAC GAAACAGTAG CAGAGCACTT CCACTGGATG AACGTACCAT TCATGTACCG TGTCCATGAA GATCCGAAAG AAGATAAGTT AGAGCGTTTC TTCGAGTTTG TAACGAACTT CGGATATGCA GTAAAAGGAC GTGCGAATGA AGTACATCCT CGCGCGCTAC AACAAATTCT TGAAATGGTT CAAGGACAGC CAGAAGAAGT AGTAATCTCA ACAGTTATGC TTCGTTCTAT GAAGCAAGCA CGTTACGATG CAGATAGCTT AGGACATTTC GGTTTATCAA CTGAGTTCTA CACACATTTC ACATCGCCAA TTCGTCGTTA CCCAGATACG ATTGTTCATA GATTAATTCG TGAATACATC ATTAACGGTA AAGTCGACAA TGAAACACAA GCAAAGTGGC GTGAAAAATT ACCTGAGATT GCAGAGCACT CTTCTAATAT GGAGCGTCGT GCTGTTGAAG CAGAACGTGA AACAGATGAG CTGAAAAAAG CAGAATATAT GCTTGATAAG ATTGGCGAAG AGTATGACGG TATGATTAGC TCTGTAACAA ACTTCGGTTT ATTCGTAGAG CTTCCAAATA CAATTGAAGG TCTTGTACAC GTTAGCTACT TAACGGATGA TTACTACCGT TACGATGAGC AGCATTTCGC AATGATCGGA GAACGTACAG GTAACGTATT CCGCATCGGT GACGAAATTA CAATTCGTGT TATTAATGTA AACAAAGACG AGCGTGCAAT CGACTTTGAA ATCGTTGGCA TGAAAGGTAC ACCTCGTCGT AAGTTCAAAG ACCGCCCAGT CGTTATTGAA CAGCCAAGAA CAGGTAGAAA GAAACGCGGT GGACGTAGCG AGCGCAGTAA TGAGCGCGGC GGAGAACGTG GCACAGGAAG AAAATTTGAC CGTGGTGGCA AAGGGAAAGG AAGAGGATCT GCATCCGCAT CTACGTCCGC TAGCCAGCCA GGGAAAAAAG ATGGTAACGG CAAGAAGAAA AAAGCATTCT TCGAAAACGT ACCAGGATTC AAGAAGAAAA AGAAAAAGCG TAAGTAA
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Protein sequence | MEEIIQEHID KLLLFMREEA YKPLTIQELE EAFGIEGSEG FKDFVKALVT MEEKGLVIRT RSNRYGLPEK MNLIRGKLIG HARGFAFVVP DEKKTGDDDL FIPPTELNGA LHGDTVLARL SSQSSGSRQE GSIVRILERG TKELVGTYTE SKNFGFVIPD NKRWTSDIFV LKSASMGAVE GHKVVVKITS YPENRLSAEG EVIQILGHKN DPGVDILSVI HKHHLPLAFP EEVMEHANSV PETISEEDLK DRRDLRDQMI VTIDGADAKD LDDAVTVTKL ENGNYKLGVH IADVSHYVQE GSPIDVEAAE RATSVYLVDR VIPMIPHRLS NGICSLNPKV DRLTLSCEME INNLGDVVKH EIFQSVIKTT ERMTYADVRS ILEDEDEELM KRYEPLVPMF KEMGQLAQIL REKRMRRGAI DFDFKEAKVL VDEEGKPTDV VMRDRSVSEK LIEEFMLVAN ETVAEHFHWM NVPFMYRVHE DPKEDKLERF FEFVTNFGYA VKGRANEVHP RALQQILEMV QGQPEEVVIS TVMLRSMKQA RYDADSLGHF GLSTEFYTHF TSPIRRYPDT IVHRLIREYI INGKVDNETQ AKWREKLPEI AEHSSNMERR AVEAERETDE LKKAEYMLDK IGEEYDGMIS SVTNFGLFVE LPNTIEGLVH VSYLTDDYYR YDEQHFAMIG ERTGNVFRIG DEITIRVINV NKDERAIDFE IVGMKGTPRR KFKDRPVVIE QPRTGRKKRG GRSERSNERG GERGTGRKFD RGGKGKGRGS ASASTSASQP GKKDGNGKKK KAFFENVPGF KKKKKKRK
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