Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_R0029 |
Symbol | |
ID | 5675722 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4615480 |
End bp | 4618588 |
Gene Length | 3109 bp |
Protein Length | |
Translation table | |
GC content | 57% |
IMG OID | 641242761 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.655069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000196644 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GGCCAAGTTA TTAAGGGCGC ACGGTGGATG CCTTGGCACC AGGAGCCGAT GAAGGACGTG GGAGGCTGCG ATATGCCTCG GGGAGCTGTC AACCGAGCTA TGATCCGAGG ATTTCCGAAT GGGGAAACCC GGCAGGGCTT TAAATCCTGT CACCCGTGCC TGAACACATA GGGCATGTGG AGGGAACGCG GGGAAGTGAA ACATCTCATT ACCCGCAGGA AGAGAAAACA ACCGTGATTC CGCGAGTAGT GGTGAGCGAA AGCGGATGAG GCTAAACCAG TTTCGTGTGA TAGCCGGCAG GCGTTGCGTA GCTGGGGTTG TGGGACTGTT CTGATGTTGC TGCCGCTTCG TCGAAGAGTG AGAAAACGTG TTGTTAGCCG AAGGTCATGC GAATGGACCG CCATAGAGGG TAATAGCCCT GTAGGTGAAA ACGGCACGTC TCTTGAGCAG TATCCCAAGT AGCACGGAGC CCGTGAAATT CCGTGTGAAT CTGGCGGGAC CACCCGCTAA GCCTAAATAC TCCCTGGTGA CCGATAGCGG ACTAGTACCG TGAGGGAAAG GTGAAAAGTA CCCCGGGAGG GGAGTGAAAT AGTACCTGAA ACCGTGTGCC TACAATCCGT GGGGGCTGGG CTTTTCGGAG CCTGGTGACC GCGTGCCTTT TGAAGAATGA GCCTGCGAGT TTGCGGTGTG TGGCGAGGTT AACCCGTGTG GGGTAGCCGT AGCGAAAGCG AGTCCGAATA GGGCGTCTGA GTCGCATGTC CAAGACCCGA AGCCGAGTGA TCTACCCATG GCCAGGTTGA AGCGCGGGTA AGACCGTGTG GAGGACCGAA CCCACCAGGG TTGAAAACCT GGGGGATGAG CTGTGGGTAG GGGTGAAAGG CCAATCAAAC TCGGTGATAG CTGGTTCTCC CCGAAATGCA TTTAGGTGCA GCGTCACGTG TTTCTTGCCG GAGGTAGAGC ACTGGATGGC CTAGGGGGCC TACAAGCTTA CTGAAGTCAG CCAAACTCCG AATGCCGGTA AGTGAAGCGT GGCAGTGAGA CTGCGGGGGA TAAGCTTCGT AGTCGAGAGG GAAACAGCCC AGATCGCCAG CTAAGGCCCC TAAGCGTGCG CTAAGTGGAA AAGGATGTGG AGTCGCATAG ACAACCAGGA GGTTGGCTTA GAAGCAGCCA CCCTTGAAAG AGTGCGTAAT AGCTCACTGG TCAAGTGATT CCGCGCCGAC AATGTAGCGG GGCTCAAGCG CACCGCCGAA GCTGCGGCAT GCATAGTGAA CCCGGCCTTT TCGGAGGTCC AGGTCTGTGC GTGGGTAGGG GAGCGTCGTA TGGCGTGTGA AGCGGCGGGG TGACCCAGCC GTGGATGCCA TACGAGTGAG AATGCAGGCA TGAGTAGCGA ATGACGGGTG AGAATCCCGT CCGCCGAATG ACCAAGGGTT CCTGGGGCAG GCTTTTCCGC CCAGGGTGAG TCGGGACCTA AGGCGAGGCC GACAGGCGTA GTCGATGGAC AACGGGTTGA TATTCCCGTA CCGGCGCTGA CGCGCCCATG CTGAACCTGG TTTGTGCTAA CCGTTCTGGT TCTTGTTCTG CCTTCGGGTG GGGCTTGGGC TGGTCGGGAC CCCGGCTGGT AGTAGGCAAG CGATGGGGTG ACGCAGGAGG GTAGTCCAAC CCAGGAGGTG GTTTTCCTGG GGCAAGGGTG TAGGGCGAAG TGCAGGTAAA TCCGTGCTTC ATGTGCCTGA GACCTGATGC CGAGCCGATT GTGGCGAAGT GGGTGATCCC ATGCTGCCGA GAAAAGCCTC TAGCGAGTGT CAGGGCCGCC CGTACCCTAA ACCGACACAG GTGGTCAGGT AGAGAATACC GAGGCGTGCG AGTGAACTGT GGTTAAGGAA CTCGGCAAAA TGCCCCCGTA ACTTCGGGAG AAGGGGGGCC ACTTCCTGTG TAGGAGTTTA CCTCCGAAGC GGGGAGGGGC CGCAGAGACC AGGGGAAAGC GACTGTTTAC TAAAAACACA GCTCCGTGCG AAGTCGTAAG ACGATGTATA CGGAGTGACG CCTGCCCGGT GCTGGAACGT TAAGGGGACG GGTTAGCTCT TTGGGGCGAA GCTCAGAACT TAAGCGCCAG TAAACGGCGG TGGTAACTAT AACCATCCTA AGGTAGCGAA ATTCCTTGTC GGGTAAGTTC CGACCTGCAC GAATGGCGTA ACGACTTTCC TACTGTCTCA ACCACAGACT CGGCGAAATT GCATTACGAG TAAAGATGCT CGTTACGCGC GGCAGGACGG AAAGACCCCG GGACCTTTAC TACAGCTTGA TATTGGTGTT CGGTTCGGTT TGTGTAGGAT AGGTGGGAGA CTGTGAAGCT GGGACGCCAG TTCCGGTGGA GTCATTGTTG AAATACCACT CTGGTCGTAC TGGATGTCTA ACCTCGGTCC GTGATCCGGA TCAGGGACAG TGTCAGGTGG GTAGTTTAAC TGGGGCGGTT GCCTCCTAAA GGGTAACGGA GGCGCCCAAA GGTTCCCTCA GCCTGGTTGG CAATCAGGTG TTGAGTGCAA GTGCACAAGG GAGCTTGACT GTGAGACAGA CATGTCGAGC AGGTGCGAAA GCAGGGACTA GTGATCCGGC GGTGGCTTGT GGAAGCGCCG TCGCTCAACG GATAAAAGGT ACCCCGGGGA TAACAGGCTG ATCTTGCCCA AGAGTCCATA TCGACGGCAA GGTTTGGCAC CTCGATGTCG GCTCGTCGCA TCCTGGGGCT GGAGTAGGTC CCAAGGGTTG GGCTGTTCGC CCATTAAAGC GGTACGCGAG CTGGGTTTAG AACGTCGTGA GACAGTTCGG TCCCTATCCG CCGCGCGCGC AGGAGACTTG AGAAGGGCTG TCCCTAGTAC GAGAGGACCG GGACGGACGA ACCTCTGGTG TGCCAGTTGT TCTGCCAAGA GCATGGCTGG TTGGCTACGT TCGGAAGGGA TAACCGCTGA AAGCATCTAA GCGGGAAGCT CGCTTCGAGA TGAGGTCTCC CACAGGGTAG CCTGGTAAGG CCCCCGACTA GATGATCGGG TTGATAGGCC GGAGGTGGAA GTGCGGCAAC GCATGGAGCT GACCGGTACT AATAGGCCGA GGGCTTGAC
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Protein sequence | |
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