| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7335 |
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| Symbol | |
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| ID | 5675636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8972137 |
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| End bp | 8974401 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641246172 |
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| Product | putative alpha-1,2-mannosidase |
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| Protein accession | YP_001511560 |
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| Protein GI | 158319052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.795016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCGG GTGCACACGG CAGAACTACA CGGGCATCAG ACCTCGCGAC TCAGACCGCG
GACGCTGTCT CCGCAGGCGA CGACCTGGCC AAGTTTGTCG ACCCGTTTAT CGGCACTGCG
CAGCAGCGTC ATGATGTCAT ACCCGGCGAT GGGGTCGCGG GTGCTTTTCC AGGAGCCGCG
GCGCCGTTCG GGATGGTCCA GTGGAGCCCG GACACCAACG GACGGGCGGC TGCGGGGTCG
GGCGGGTACC GGTACACCGA CTCGGTAATA GACGGATTCA GCCTGACCCA CTTACATGGC
ACGTCGTGTC CTGCGGCCCA GGATATTTCG ATCATGCCGT CTACCGGCTC CTATCCCTTC
TATCCACCCA CCGGCGCCGT GGACGAGCCA TCGTTGTGGG GCGCCGGATT CTCTCATGGC
GACGAGTCGG CCACACCCGG TCGCTACAGC GTTCAGGTCA CCTCGCCGAC GGGTGATCGG
ATAGGTGCGG ATCTCGCCGC CGGAGCCCGT GCGGCGATTG GTCGCTTCTC GTTTCCGGCA
GGCGTGGCGG GATCCCTGGT CCTCGACGTG GGACGCCGTG CCGACGGCGC CGGCCGGGCG
GACCTGCATG TGGACTCCGC CACCGGGGAG GTTTCAGGCT CGGTGACCAG CCGGGTCTTC
TGCCGGCAAC CAGCCGTCAG CACGCTTTAC TTCGTCGCGA GACCTGATCG GCCGCCGGCG
GCTGTGGGCA CCTGGTCGGC GGGGCGATGG TCACTGAGCC CGGACGCGGC CGACGAGGGA
GGACCCACCG CGACGTCGCG TTCCGCATCG GTCGGAGCCT GGCTGAGAAT GCCACCGGCA
GCAGACGGAG CGGTCATGCT CCGTGCTGCT GTGTCGTATA CCAGCGTCGA GGGGGCGCGC
GCCAATCTCG AGGCCGAGTA CCCCAGCAGT GTCGAGGCGG TCGCGAGCGC CACCCGTGCC
GAATGGAACC GGAGGCTGTC GACCGTGTGT GTCGCCTCCG CGCCACGGTC CGAGTTACGC
ACCCTGTACA CAGCGCTCTA TCACGCGATG CTGGGCCCCG GTGCCGTCAG CGATGCCGAC
GGCACCTACC GTGGCTGGGA CGGATCCACC GCCGCCGCCC AGGGATGGAC CGCACGCAGC
GGGATCGCGG GCTGGGACGC CTACCGCAGC TCGTTCCCAT TACTGGGGAT GCTGGCTCCG
GACGTCGCTA CCGACACCGC ATGGTCGTTG ATAGCCGGCA CCATGCAGAC CGGGTCGGTG
CCAGGATGGA CTCTCGCGAC CAGTCGGCCC GACGTCATGC CTGGCGACGG CGGCACGGTC
CTGCTTGCCG AGGCGGTGGC TCTCGGGTTG CCCCTTGACC CAGCACAGGC TTTGGCCGCC
GCGCTGGCCA GCGCGGCCCG CCGCCCGTTC GCGGCCGAGT ACGACCGACT CGGCTTCGTC
CCGGTCGGCC CCACCGGCCC CGCGGATGCT GTGTCCATCA CTCTCGAGTA CGCCCTCGCG
GACTTCGCGA CAGCGCAACT GGCGCTTGCC GCGAACCGGC CCGAAATCGC GGCTACCTTC
ACTGAACGGT CGACGCGCTG GCGGTCGGTA TGGGATCCGG TCAGTAAGCT GCCCGCCCCG
CGCAGCACGG ACGGTGGCTT TCTACCAGTG GAGCCGACGA CCCTCCCCGG CTACACCGAA
GGCACCGCGG CCCAGTACTC ATGGCTGGTT CCGCAGGATC CCGATGGCCT CGCCGAGGCG
ATGGGCGGAC GGCGCGTCGC GGTTGACCGG CTCGCCGACT TCCTCGCCCG GCTCGACGAC
GGCCCGATCG GGGCACATGC GGAGATGGGA AACCAGCCCA GCCTCCTCGT ACCCTGGCTC
GGAGGATCGT TCGGCGCCGT CGATCTGACG ATCGACGCTC TCGACCGGAC GCGCCGGACT
TTGTTCCGGG ATACTCCCGA CGGTCTGCCC GGGAATGACG ACACTGGGGG CCTGTCCGCC
TGGTACGTGC TCGCCTGGCT TGGACTGGGC CCCGTCCAAC CGGGAACAGA CCTGCTCATC
GTCACTCCGC CGGTCGCCTC ATCGGTCGAG ATCACCCTTC CTCACGGACA GCTTCGGTTG
GTGAACCAGC AGGTCGGCGG GGGGGATGGT CGCATACCGG TCGGGCTGAG ACGTGACGGC
GAGTCGCTCC CCGGACCCTG GATCCGGTTT CGCGATCTCA GCGCAGGAGC GACTCTGACC
TGGTCACTGT CCGATCAGCC GACCGCCCGG GGTACGGAGA ACTGA
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| Protein sequence | MRPGAHGRTT RASDLATQTA DAVSAGDDLA KFVDPFIGTA QQRHDVIPGD GVAGAFPGAA
APFGMVQWSP DTNGRAAAGS GGYRYTDSVI DGFSLTHLHG TSCPAAQDIS IMPSTGSYPF
YPPTGAVDEP SLWGAGFSHG DESATPGRYS VQVTSPTGDR IGADLAAGAR AAIGRFSFPA
GVAGSLVLDV GRRADGAGRA DLHVDSATGE VSGSVTSRVF CRQPAVSTLY FVARPDRPPA
AVGTWSAGRW SLSPDAADEG GPTATSRSAS VGAWLRMPPA ADGAVMLRAA VSYTSVEGAR
ANLEAEYPSS VEAVASATRA EWNRRLSTVC VASAPRSELR TLYTALYHAM LGPGAVSDAD
GTYRGWDGST AAAQGWTARS GIAGWDAYRS SFPLLGMLAP DVATDTAWSL IAGTMQTGSV
PGWTLATSRP DVMPGDGGTV LLAEAVALGL PLDPAQALAA ALASAARRPF AAEYDRLGFV
PVGPTGPADA VSITLEYALA DFATAQLALA ANRPEIAATF TERSTRWRSV WDPVSKLPAP
RSTDGGFLPV EPTTLPGYTE GTAAQYSWLV PQDPDGLAEA MGGRRVAVDR LADFLARLDD
GPIGAHAEMG NQPSLLVPWL GGSFGAVDLT IDALDRTRRT LFRDTPDGLP GNDDTGGLSA
WYVLAWLGLG PVQPGTDLLI VTPPVASSVE ITLPHGQLRL VNQQVGGGDG RIPVGLRRDG
ESLPGPWIRF RDLSAGATLT WSLSDQPTAR GTEN
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