Gene Franean1_7210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7210 
Symbol 
ID5675511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8803104 
End bp8804975 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content73% 
IMG OID641246047 
Productamidophosphoribosyltransferase 
Protein accessionYP_001511435 
Protein GI158318927 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID[TIGR01134] amidophosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACACG TCGCCCACAG CGACGACCCC GCATCTCGCC GGGAGTCGAC GTCCGTCCGC 
CGCCCGCCGC AGTCTCGCGA CGGCCGCCGT CGCGACGGCC TTCTCCACGG TGCCCCGCGC
AACGGTGATC CTCTCGACAG CGATCTTCTC GACGACGATC CCGGCCCGCG CGACGCCTGT
GGCGTCTTCG GTGTCTGGGC GCCCGGGGAG GACGTGGCGA ACCTCACCTA CTACGGCCTC
TACGCTCTCC AGCACCGCGG CCAGGAGGCC GCCGGGATGG CGGTCGGCGA CGGCCGCACC
GTCGTCGTGT TCAAGGAGCT GGGTCTGGTC GCCCAGGTCT TCGACGAGAT CACCCTCTCC
AGCCTGTCGG GGCACGTGGC CGTCGGGCAC ACCCGGTACT CGACCACAGG CTCGTCCACC
TGGGAGAACG CCCAGCCGTC CTACCGGACG GCGGGTTTCG GCGGGCCGAT CGCGCTCGGC
CACAACGGCA ACCTGACGAA CATCGTCGAG TTGGCCGGGT CGCTCGGCGA CAGCGAGGGC
GGCCAGGGCG CCACCACCGA CTCCGACCTG ATCACCGCGA TGCTCGCCGC GCATCCTGGC
CCGACCCTGG TCGACGCCGC GATGGACGTC CTGCCCCGGC TGGCGGGGGC CTTCTCGCTG
GCGTTCGCGG ACGCGTCGAC CCTGTACGCG GCGCGGGACC CGCACGGCAT CCATCCACTG
GTGCTGGGCC GGCTCGACGA CCGGCCGGAC GGCGCGTGGA TCGTCGCCAG CGAGACCGCG
GCGCTCGACA TCGTGGGCGC CCGCTTCGTC CGCGAGATCG AGCCCGGTGA GCTGGTCGTC
ATCGACGCGG ACGGCCCGCG CTCGCTCACG TTCGCGCAGG CCGACCGGCA CGTCTGCCTG
TTCGAGTACG TCTACCTCGC CCGCCCGGAC ACGACGATCG GTGGCCGGTC GGTGCACGCC
ACCCGGGTCG AGGTGGGCCG GCGGCTCGCC CGGGAGGCAC CGGTCGAGGC CGACCTGGTG
ATCCCGGTCC CGCAGTCCGG TGTGCCGGCC GCGGTCGGCT TCGCCGAGGC GTCCGGCATC
CCGTTCGGTG AGGGCCTGGT CAAGAACTCC TACGTCGGGC GGACGTTCAT CCAGCCGTCG
CAGACCATCC GCCAGCGGGG CATCCGGCTC AAGCTGAACC CGTTGCGCGA CGTCATCGAG
GGCCGCCGGC TCGTCGTCGT GGACGACTCG ATCGTGCGCG GCAACACCCA GCGGGCCCTG
GTGCGGATGC TGCGCGAGGC CGGGGCGACC GAGGTGCACG TGCGGATCTC GTCGCCCCCG
GTGCGGTGGC CCTGTTTCTA CGGCATCGAC TTCGCCACCC GCGCCGAGCT GATCGCCAGC
GGCTGTGGCG TGGAGGAGAT CCGGCGCTCG CTGGGTGCCG ACTCGCTCGC CTACGTCTCC
CTCGACGAGC TGGTGGAGGC CTCCGAGCAG CCGGCGGACG CGCTGTGCCG GGCCTGCTTC
GACGGCATCT ACCCGGTTCC GCTCGCCGAC TCGGACAAGC TGGGCAAGTA CCGGCTGGAG
CCGTTCGGGC CGCAGACCAC GGAGGAGGTC ATCGCGCAGG CCCTCCGGGA GCGGGTAACC
CTGGGTATGA ACGGCGCGGA CCCGTCCCCC GACAACCACG ATCTCGACCT CGAACCCGTC
CCGCTCGAGC CCGCCCAGGA CGTCGGCGCC GCGCGCGCGA ACGGGGCACG GCCCGACGGG
ACGAGGGCCG ACGCCGTGGC GGTCGACGGC GCACCGGCCG ACGGGGTGGC CACGAACGGA
GCCATCGTGA ACGGGATGAC AGCGGACGGG GTGGCAGTGG ACGGCGCACC GCTGGGCAGC
GCGCGGTGGT GA
 
Protein sequence
MPHVAHSDDP ASRRESTSVR RPPQSRDGRR RDGLLHGAPR NGDPLDSDLL DDDPGPRDAC 
GVFGVWAPGE DVANLTYYGL YALQHRGQEA AGMAVGDGRT VVVFKELGLV AQVFDEITLS
SLSGHVAVGH TRYSTTGSST WENAQPSYRT AGFGGPIALG HNGNLTNIVE LAGSLGDSEG
GQGATTDSDL ITAMLAAHPG PTLVDAAMDV LPRLAGAFSL AFADASTLYA ARDPHGIHPL
VLGRLDDRPD GAWIVASETA ALDIVGARFV REIEPGELVV IDADGPRSLT FAQADRHVCL
FEYVYLARPD TTIGGRSVHA TRVEVGRRLA REAPVEADLV IPVPQSGVPA AVGFAEASGI
PFGEGLVKNS YVGRTFIQPS QTIRQRGIRL KLNPLRDVIE GRRLVVVDDS IVRGNTQRAL
VRMLREAGAT EVHVRISSPP VRWPCFYGID FATRAELIAS GCGVEEIRRS LGADSLAYVS
LDELVEASEQ PADALCRACF DGIYPVPLAD SDKLGKYRLE PFGPQTTEEV IAQALRERVT
LGMNGADPSP DNHDLDLEPV PLEPAQDVGA ARANGARPDG TRADAVAVDG APADGVATNG
AIVNGMTADG VAVDGAPLGS ARW