Gene Franean1_7196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7196 
Symbol 
ID5675497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8787956 
End bp8789509 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content67% 
IMG OID641246033 
Producthypothetical protein 
Protein accessionYP_001511421 
Protein GI158318913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.594351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCAGG TCTGCTGCCT AGCCATTGTC ATCGTGGCCG GGAACGGCCC GTTCCTCAGC 
GCCTGGGCGA CCGACAAGTA CGACACCTGG CGCTCGCACC AGCCGGACTA CATGCGTCAG
TACGGCCGCT GGGACATCGT CGCCGACCCC GGTTCGCGCT CCATCCACGC GGCGCTGCTG
CGGACCGGGA AGATTCTGCT GCTGGCCGGT TCGGGAAACA ACCAGGCCAA CTTCGACGCC
AAGCGCTTCG AGACCCTGCT GTGGGACCCG ACCGCCAACA CCTTCGAGCA GGTCTACACG
CCGTGGGACG TCTTCTGCGC CGGCCAGGCG TTTCTTCCGA GCGGTGAGCT GCTCATCGCC
GGCGGCACGA AGAAGTACGA GGTCCTCGCC CAGGACTCGC CGGACGGCAA GAAGCAGGAG
TACCAGGGGC TGAAGGACAG CTACACGTTC AATCCGCAGA CGGAGCGGTA CGAGAAGACC
GGCGACCTGA ACTTCGCCAG GTGGTACCCG ACCCTGGTCA CGCTGGCCAG CGGCCAGGTG
GTCGCGGTCT CCGGCCTGAA CGAGAAGGGC GACATCGACC CAGGCAACAC GGAGTGGTTC
GACCAGGCGA ACCGGACGTG GAACCACAAC GAGGGGCTGG TCAAGGAGTT CCCGACCTAC
CCGTCGCTGC TGCTCGCCGG GGACGGCCGG CTGTTCTTCT CCGGCGCGAA CGCCGGTTAC
GGGCCGGCCT CGCTGGAAGC CCGCCAGCCC GGATTCTGGA GCCTCGCCGA CGGTACGTTC
CAGGCGGTTC CGGGCCTGCC TCAGCCGGAG ATCAACGAGA CCGCCGGAAC GGTGATGCTG
CCGCCGGCCC AGGAACAGCG GGTGATGTTC GTCGCCGGCG GCGGCGTCGG CGACACCCAG
GTGGCCACCG CCCGCACCGC GATCGTCGAC CTGGACGACC CGAATCCCCA TTACGTCCCG
GGGCCGAACA CCACTGTCGC GAAGCGGTAC CCCGGCGTCG TCGTCCTGCC GGACGACACC
GTGCTCGTCT CCGGCGGCTC CACCGCCTAC CGCCAGAAGG ACACCCAGAC GGCGGAGATC
TACCACCCGG ACACGAACAC CTTCACCACA GCCGCCGACC CGCTCGTCGG CCGGGACTAC
CACTCGAGCT ATCTACTGAT GCCCGACGGC CGGGTGGCGG TTTTCGGTTC CAATCCGCTG
AGCGACGACA ACTTCTTCGA GACCCGGATC GAGATCTACA GTCCGCCCTA CATGTACCAG
GGTGAGCGGC CGGTCATTAA GACCGCGCCG ACCTCGGTCA CCCGTGGCAC CACAATCGAT
CTGGGCGTCT CCCAGGAGGT TTCCAAGGTC CGCCTGATCC GTCCGGGCGC CTACACGCAC
GTGACCGACA CCGAGCAGCG CTCGGTGGCC CTCCCCCTGG TCAGCCAGGC GAACGGCAAG
GTAACGGTGA GTGTTCCCGA CAACGCCAAC CTGCTGCCGC CGGACTGGTA CATGCTCTTC
GTCGACAACG GCGAGAACAT TCCGTCCGTC GCCACCTGGG TGCAGGTCCA GTGA
 
Protein sequence
MVQVCCLAIV IVAGNGPFLS AWATDKYDTW RSHQPDYMRQ YGRWDIVADP GSRSIHAALL 
RTGKILLLAG SGNNQANFDA KRFETLLWDP TANTFEQVYT PWDVFCAGQA FLPSGELLIA
GGTKKYEVLA QDSPDGKKQE YQGLKDSYTF NPQTERYEKT GDLNFARWYP TLVTLASGQV
VAVSGLNEKG DIDPGNTEWF DQANRTWNHN EGLVKEFPTY PSLLLAGDGR LFFSGANAGY
GPASLEARQP GFWSLADGTF QAVPGLPQPE INETAGTVML PPAQEQRVMF VAGGGVGDTQ
VATARTAIVD LDDPNPHYVP GPNTTVAKRY PGVVVLPDDT VLVSGGSTAY RQKDTQTAEI
YHPDTNTFTT AADPLVGRDY HSSYLLMPDG RVAVFGSNPL SDDNFFETRI EIYSPPYMYQ
GERPVIKTAP TSVTRGTTID LGVSQEVSKV RLIRPGAYTH VTDTEQRSVA LPLVSQANGK
VTVSVPDNAN LLPPDWYMLF VDNGENIPSV ATWVQVQ