| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7161 |
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| Symbol | |
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| ID | 5675462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8742804 |
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| End bp | 8743481 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641245998 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001511386 |
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| Protein GI | 158318878 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0588186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.118819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC GCGTCCTCAT CGTCGACGAC CAGGCGCTGG TCCGCGGAGG CCTGGCCATG
GTCCTGCGGG TACACGGCGA CATCGAGGTT GTGGCCGAGG CCGGGACCGG GCTCGAGGCG
ATCGAGGCGG CGCGACAGCA TCGTCCCGAT GTGATCCTCA TGGACATCCG GATGCCGGCG
ATGGACGGAC TCGAAGCGAC CTCAAGAATC CTCGCCGAGG CCGACTGGGA CGTGCGGGTG
CTCATCCTGA CCACGTTCGA TCCGGACGAG TACGTCTACC AGGCACTACG CGCCGGCGCC
AGCGCCTTCG TGCTCAAGGA CATCCCCGCC GACCAGCTCG CCGGCGCCGT CCGCACGGTG
GCAGACGGCG GCGCGCTGCT GGCACCGTCG ATCACCCGGC GTCTCATCGG GCGGTTCACC
GAGCGCCGGG CTGTCGGCTC CGCCCCCTCC CGCCGTGTGG AGCGCCTCAC CGACCGGGAG
CGTGATGTGG TGGTCGCCGT CGCCCGGGGG TCCAGCAACT CGGAGATCGC CCAGGAACTC
TTCATCGGAC CCGCGACCGT CAAGTCGCAC GTGTCGAGCA TCCTCACCAA GCTCGGATTG
CGCGACCGTA CCCAGGTTGT GGTCTTCGCG TACGAAAGTG GACTGGTCGA AGCCGGCGAC
CATGACATCG GCCGATGA
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| Protein sequence | MSIRVLIVDD QALVRGGLAM VLRVHGDIEV VAEAGTGLEA IEAARQHRPD VILMDIRMPA
MDGLEATSRI LAEADWDVRV LILTTFDPDE YVYQALRAGA SAFVLKDIPA DQLAGAVRTV
ADGGALLAPS ITRRLIGRFT ERRAVGSAPS RRVERLTDRE RDVVVAVARG SSNSEIAQEL
FIGPATVKSH VSSILTKLGL RDRTQVVVFA YESGLVEAGD HDIGR
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