| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7124 |
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| Symbol | |
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| ID | 5675427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8693594 |
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| End bp | 8695147 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641245960 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001511351 |
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| Protein GI | 158318843 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGGT CGGGGTCGCA GCGGTGGTGG GCGCTGGGGG CGGTCAACCT GAGCGTGCTC
GCCGTCAGCC TGGACGGCAC GGTCCTGTCG GTGGCTCAAC CGACGCTGTC GACGGCGCTC
GGCGCCTCGC AGTCCGATCT GGTGTGGTTC TCCGCTGGTT ATCTGCTCGT GCTGGCCGCG
GCCGTGCTGC CCGTCGGCTT GGCAGGTGAC CGTTTCGGAC GCCGCAGAGT CCTGCTCGCG
TCGCTGGCCA TATTCGGGCT GGGGTCCGTG CTCTGCGCCT ACGCGGGGTC GCCGGGGGTG
TTCCTTGCGG GACGGTTGTT CCAGGGTCTG GCCGGCGCCG GTATCACCGT GATGGCACTG
TCCGCCCTGG TCGTCCTGTT CGACGAGCAG GAACGTCCGA GAGCGGTGGG GATCTACCAG
GCGGCGAACT TCGTAGCCCT GCCGCTCGGC CCGATTCTCG GTGGCTGGAT GCTGTCGCGG
TTCTGGTGGG GCTGGGTCTT CCTGCTCAAC GTGCCGGTCG TCGTCCTCGC GGCAGTGATC
GGCTTCGTCC TGATCCCGGA GTCGCGATCG ACGCAACGCC CTGGTCTGGA CCCGGTCGGC
ACCGCGGCGT CAGCGTCTGG ACTGGCAATG GTGATCTACG GTTTGGTGCG CGCGGGGGAG
CGCGGCTGGG GCAGCCTGGA CGCGCTGCTG TCGATGGCCG CCGGAGCCGC GGTGGTGGTC
GGGTTCGTCT GGTGGGAGCG CAGGCTTGGT CGGCGGCCGA CCGGCCGGCC GCTGGTCAAC
CCGCAGCTCC TGCGGCCGGG GCTGTTCCTG TGGGGATCGG CACTCGCCGC GGTCGCGGGT
CTGGCGATGA TCGGAGTGCT GTTCACGATG CCTCAGTACT TCCAGGGAGT GCGGGGTACC
GGCACCCTGG GCAGCGGCCT GCGGCTACTG CCCCTCATCG GCGGCATGGT CGTCGGCGCC
GGGCTCGCCA GCCGGCTCGC ACCGGCGATC ACCACGCGAC TGGCGGCAGC GCTGGGGTTC
ATACTCCTGG CGGGCGGTCT CATCGTGGGA GCCACCACGA CGTCCACCTC TGGCACGGTA
TTCACCGCAG GGTGGACGGC GCTCGTCGGC GCGGGAACAG GACTGGCCCT GTCGGTGGCG
ACCGCGGCGG CACTGGCCGG GTTGTCGGCC GAACGCAGCG GCACTGAGTC CGCTGTCGTG
CAGGCGTTCA ACAAGACAAG CGGCCCACTT GGTACAGCGA TCACCGGCAG TGTCCTCGTT
GCGGTCTACC ACGCCCGACT CGACAGCGTC GGGCTCCCGG AGACGGTGGC CGCAACGGCA
CGCAGGAGCC TCTACGGCGG CACGGCCACC GCACAGGCAG CCGGGGGACC AGGGCTGGAG
CAGGCGGTCC GCGCGGCGTT CGTCGACGGG ATGAGCGCCG CGTTCCTGGT ATCCGCCGTG
ATCGCCATAC TTGGAGCCTG CGTGGCTCTG GCAGTCCTTC CCCGGGGCCG ATCGCGTAGA
ACGGAAGCCG GTCAGCCGAC CGAGGAAGGG ACCGTCGATG CCGTCGAGCA CTGA
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| Protein sequence | MQRSGSQRWW ALGAVNLSVL AVSLDGTVLS VAQPTLSTAL GASQSDLVWF SAGYLLVLAA
AVLPVGLAGD RFGRRRVLLA SLAIFGLGSV LCAYAGSPGV FLAGRLFQGL AGAGITVMAL
SALVVLFDEQ ERPRAVGIYQ AANFVALPLG PILGGWMLSR FWWGWVFLLN VPVVVLAAVI
GFVLIPESRS TQRPGLDPVG TAASASGLAM VIYGLVRAGE RGWGSLDALL SMAAGAAVVV
GFVWWERRLG RRPTGRPLVN PQLLRPGLFL WGSALAAVAG LAMIGVLFTM PQYFQGVRGT
GTLGSGLRLL PLIGGMVVGA GLASRLAPAI TTRLAAALGF ILLAGGLIVG ATTTSTSGTV
FTAGWTALVG AGTGLALSVA TAAALAGLSA ERSGTESAVV QAFNKTSGPL GTAITGSVLV
AVYHARLDSV GLPETVAATA RRSLYGGTAT AQAAGGPGLE QAVRAAFVDG MSAAFLVSAV
IAILGACVAL AVLPRGRSRR TEAGQPTEEG TVDAVEH
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