Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7119 |
Symbol | |
ID | 5675799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8689338 |
End bp | 8689886 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245955 |
Product | NLP/P60 protein |
Protein accession | YP_001511346 |
Protein GI | 158318838 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGACCT CGGCTGATGA AGCCGCGCCA GGGAGCGAAA TCGGGACGGG CAAGGTCGGC ATAACGCCAG CCGGGCAGGC GTATGTGGCG CGGGTTCTTG CTGTTGCCGC GTCCTACGGC CAGGATTTCG CTCCTGCTGC TGCGGACGGC GCTGGTGAGG TCGCCGCGAC GTGGGCGCTT TCTCAGGTGG GTGTCCCGTA TGTGTGGGGC GGTGAGACGC CGGGGGTCGG GTTCGACTGT TCTGGGCTGA CCCAGGCTGC TTTCGAGGTG GCCGGGATCG GGCTGCCTCG GGTGGCTCAG GGCCAGTTCG ACGCCGGGCC CCGCCTTCCG GCTGGTGCCG GGCTGCGGCC TGGTGACTTG GTGTTCTTTG GTGGCGGGCC GGCGGACGTC ACCCATGTCG GTCTCTACCT GGGAGTCCGG GATGGCCGGC CGGTGATGGT GGACGCGCCT CACCGAGGCG CCGTCGTCCG GGTCGAGGCG TTCCCGACCG TGGTAGGGGC CGCCTGGGGT GCGGACATCT ACCTGGGCGC CACCCGACCC GCCCCCTGA
|
Protein sequence | MPTSADEAAP GSEIGTGKVG ITPAGQAYVA RVLAVAASYG QDFAPAAADG AGEVAATWAL SQVGVPYVWG GETPGVGFDC SGLTQAAFEV AGIGLPRVAQ GQFDAGPRLP AGAGLRPGDL VFFGGGPADV THVGLYLGVR DGRPVMVDAP HRGAVVRVEA FPTVVGAAWG ADIYLGATRP AP
|
| |