Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6944 |
Symbol | |
ID | 5675257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8461147 |
End bp | 8462643 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245793 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001511184 |
Protein GI | 158318676 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.419184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCA CCGACTCCCG CACAACACAC CAGGAGCCCG CGGCCACCGA CGGGATCAAC CCTGATCATC CTCGACGCTG GTGGATCCTC GCTGTTCTCG GGGTCGCGCA GCTGATGGTC ATCCTCGACA CGACGATCGT CAACATCGCG ATGCCCTCGG CCCAGCGCGA CCTGGGTTTC TCTGACGGTG CGAGGCAGTG GGTCATAACC GCCTACGCGC TGGCGTTCGG CAGTCTGCTG CTGCTCGGCG GGCGCATCGC CGACCTGTTC GGCCGCAGGA TGGCGCTGCT GGCCGGGTTG GCCGGCTTCG CCGCGGCCTC CGCCGTCGGC GGGGCGGCCG TCAATTTCGG CATGCTGGTC GCCGCCCGTG CCAGCCAGGG CATGTTCGGC GCGCTGCTGG CGCCCGCCGG CCTGTCCCTG TTGTCGACGA CCTTCACCGA AACGCGGGAA CGCGCCCGGG CGTTCGGCAT CTACGGTGCG ATCGCCGGCG CGGGCGGTGC GGTCGGCCTG CTGCTCGGTG GAGTCCTCAC CGAATACCTC GACTGGCGCT GGTGCCTGTA CGTCAACCTG GTCTTCGCCG CGGTGGCGAT AGCCGGTGCG GCCGGCCTGA TTCGCCGCCA GACCGTCGAC GGACATCCGG CCCTCGACCT GCCCGGTACT CTTGCTGTCT GCGCCGGCCT GTTCAGCCTG GTCTACGGCT TCGCCAACGC GCAGACCCAT TCCTGGTCCG CTCCGGGCGC CTGGGCCCTG CTCCTCACCG GAGCCGCACT GCTGGCGCTG TTCGTGGCCC TGGAGACAAA GGTCGCGCAT CCCCTGCTCC CGATGCGGGT CCTGCTCGAC CGCAATCGCG CCGGCGCCTA CCTGACGGTC TTCGTCGTCG GCGTCGGCGT GTTCGGGATC TTTCTCTTCC TGACCTACTA CCTCCAGCAG AACCTCGGAT TCTCGCCCAT CCGTACCGGG CTGGCGTTCC TCCCGATCGT CGGCGCGGTG ATGATCACCG CCACCGTGGC GACCAGTGTC CTGTTTCCCC GGGTCGGTCC ACGGCCGCTG ATAGGCCTCG GCATGCTCAC CGCCGCGGGC GGCATGCTGT GGCTCACCAC GCTCGAGGTC CACAGCACCT ACCTGGCCGA CATCCTGCCC GCCCTCGTCA TCGCCGGAGT CGGACTGGGG CTGGCGATGG CGCCGGCCAT GAGCACCGCC ACGGCGGGTG TCGAGCCCGA CGACGCCGGG GTGGCCTCGG CGACCGTCAA CACCGCGCAG CAGATCGGCG GGTCCATCGG CATCGCCGTG CTCAGCACCA TCGCCGCCAC CGCCGCCAGT GACTACGCCC GCGGCAGGGC ACCCGGCGCC GACCTGCTCG CCCGTGCCGC CGTCCACAGC TACACCACCG CCTTCGCCTG GTCGGCAGCG ATCTTCGCCG CGGGTGCCGT CCTCTGTGGG CTGCTCGTCC GGCCCGGCGT CCCGGACACC ACCGAGGTCA CCAGCGCCGG GCTGTGA
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Protein sequence | MTFTDSRTTH QEPAATDGIN PDHPRRWWIL AVLGVAQLMV ILDTTIVNIA MPSAQRDLGF SDGARQWVIT AYALAFGSLL LLGGRIADLF GRRMALLAGL AGFAAASAVG GAAVNFGMLV AARASQGMFG ALLAPAGLSL LSTTFTETRE RARAFGIYGA IAGAGGAVGL LLGGVLTEYL DWRWCLYVNL VFAAVAIAGA AGLIRRQTVD GHPALDLPGT LAVCAGLFSL VYGFANAQTH SWSAPGAWAL LLTGAALLAL FVALETKVAH PLLPMRVLLD RNRAGAYLTV FVVGVGVFGI FLFLTYYLQQ NLGFSPIRTG LAFLPIVGAV MITATVATSV LFPRVGPRPL IGLGMLTAAG GMLWLTTLEV HSTYLADILP ALVIAGVGLG LAMAPAMSTA TAGVEPDDAG VASATVNTAQ QIGGSIGIAV LSTIAATAAS DYARGRAPGA DLLARAAVHS YTTAFAWSAA IFAAGAVLCG LLVRPGVPDT TEVTSAGL
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