Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6881 |
Symbol | |
ID | 5675194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8386074 |
End bp | 8386943 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641245730 |
Product | nitrogenase iron protein |
Protein accession | YP_001511121 |
Protein GI | 158318613 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.82086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAGA TCGCGTTCTA CGGCAAGGGT GGTATTGGCA AGTCCACCAC CCAGCAGAAC ACCATGGCTG CCATGGCCGA GATGGGCCGT CGCGTCATGA TCGTCGGCTG CGACCCCAAG GCTGACTCGA CCCGCCTCAT CCTGCACTCG AAGGCCCAGA CGTCCGTCAT CCAGCTCGCG GCGGAGAAGG GCTCGGTCGA GGACCTGGAG CTGGACGAGG TCCTGGTCGA GGGCCAGTGG GGCATCAAGT GCGTCGAGTC CGGTGGCCCG GAGCCGGGCG TGGGCTGCGC CGGCCGTGGC GTCATCACCT CCATCACCTA CCTGGAGGAG GCCGGCGCCT ACGAGAACCT CGACTTCGTC ACCTACGACG TCCTCGGCGA CGTTGTCTGC GGTGGCTTCG CGATGCCGAT CCGCCAGGGC AAGGCCCAGG AGATCTACAT CGTGACCTCC GGCGAGATGA TGGCGATGTA CGCGGCGAAC AACATCGCCC GCGGTGTCCT CAAGTACGCG CACTCCGGCG GTGTCCGCCT CGGTGGGCTC ATCTGCAACA GCCGTAACAC CGACCGCGAG GACGAGCTGA TCATCGAGCT CGCCCGCCGT CTCAACACCC AGATGATCCA CTTCATCCCG CGTAACAACG TCGTGCAGCA CGCCGAGCTG CGCCGGATGA CGGTCATCGA GTACGACCCC GAGAACAGCC AGGCCAACGA GTACCGCCAG CTGGCCAAGA AGATCGACGA GAACGACATG AAGACCATCC CCACCCCGAT CAGCATGGAC GAGCTCGAGG AACTGCTGAT CGAGTTCGGG ATCATGGAGC AGGAAGACGA GTCGATCATC GGCCAGAAGG CCAACGCGAC CGTCGCCTGA
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Protein sequence | MRQIAFYGKG GIGKSTTQQN TMAAMAEMGR RVMIVGCDPK ADSTRLILHS KAQTSVIQLA AEKGSVEDLE LDEVLVEGQW GIKCVESGGP EPGVGCAGRG VITSITYLEE AGAYENLDFV TYDVLGDVVC GGFAMPIRQG KAQEIYIVTS GEMMAMYAAN NIARGVLKYA HSGGVRLGGL ICNSRNTDRE DELIIELARR LNTQMIHFIP RNNVVQHAEL RRMTVIEYDP ENSQANEYRQ LAKKIDENDM KTIPTPISMD ELEELLIEFG IMEQEDESII GQKANATVA
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