| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6854 |
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| Symbol | |
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| ID | 5675167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8355768 |
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| End bp | 8356442 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245703 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001511094 |
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| Protein GI | 158318586 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.101929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC AGGTAGCCCA CTCCCCCGAC ACCGCCGGGT CACAACGGCC TCGGCGGCTC
ACCGCCGAGG CCCGCAAGCG CTCGATCCTC AAGGCCGCCC GCCAGGCCTT CATCGAGACG
GGCGACATGA ACGGCACGAC CATCAAGGCG ATCGCCGAGC GTGGCGGAAT CAGCGAAGGC
GTGATCTACC GCCATTTCGA GAGCAAGGAC CAGCTCTTCT ACGAGGCCGT GGTCGAGCCG
CTGCGCGAGG CCGTGGACGA GCTCGTCGCC GCGACCGAGG TCGTCGATCT CGAGGAGCCG
CTGACCCCCG AGCGGCAGCT GCAGACGATG AACGGCCTCT ACCGCCAGCT CATCTCCACC
CTGGAGGAAG TCCTCCCGCT GCTGGGCCTG GTGCTCTTCG GCGACCCGAA GGTCGGCCGG
CGGTTCTACC GCAAGCACTT CGCGGTCGCG ATGGACCGGC TCGCCGATGC CTGGCGCGAC
GTCGAGGACC GCTACGGATT CGAGTTCGAG TCGCCCGACC TCTCCGCCCG CGCGGTGATG
GGCATCGCCC TCGTCCTGGC CATGGAGAGC CGCCACAACG ACCTGTTCAA CCGCGATCGG
GCGGTCGCCC TGATCAGCGA GAGCACGATC AAGGGCTTCT TCCCCGTCAT CGAGCCCTCC
CGCCGCCGCC GCTGA
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| Protein sequence | MAEQVAHSPD TAGSQRPRRL TAEARKRSIL KAARQAFIET GDMNGTTIKA IAERGGISEG
VIYRHFESKD QLFYEAVVEP LREAVDELVA ATEVVDLEEP LTPERQLQTM NGLYRQLIST
LEEVLPLLGL VLFGDPKVGR RFYRKHFAVA MDRLADAWRD VEDRYGFEFE SPDLSARAVM
GIALVLAMES RHNDLFNRDR AVALISESTI KGFFPVIEPS RRRR
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