Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6807 |
Symbol | |
ID | 5675120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8298682 |
End bp | 8299536 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245656 |
Product | glycosyl transferase family protein |
Protein accession | YP_001511047 |
Protein GI | 158318539 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCCTC TTTCGGTCGT AATCGTTCAC CGTGACCAGC CGAAGCGACT CGTCGACACC ATCGACGCGT TCCGCGCGCA GGACGTTCCC GTCGCGATCA CGATCGTCGA CAACGGATCG GCGGTCATGC CGCCGGTCGA GGCCGCCGAT GTCACGGTGG TGCTCGCCGG CAGCAACCTG GGGTTCGGAC CGGCGGCCAA CGTCGGCTAC CGCGCGTTCC TCGCCGACGC GGACGCGGGA GAGTGGGTGG TGCTCGCGCC GCACGACGCG CTGCCCGAGC CCACCTGCCT GAGTCACATG CTGGGCGTGC TGGCGCAGCA GCCGCGAGCG GGCCTGGCCT GTGCGGACGT CGGCGACGGA GCGACGCCGG TCATCGACCC CTACTTCGGC GGAATTCTCA TGCCCGCGAG CGTGGACGAG GGCTGGGAGC CCGCCGGGCA CCCGCACGGC ACGCTGATGT TCGCCCGCCG TGTCTGCCTC GACGAGATCG GAATCTTCGA CGAACGCTAC TTCGCGTACT GCGAGGAGGC GGACCTCGCG CTGCGGGCGA GGTCCGCCGG CTGGGAATCC GGACTCGTGC GTGGCGCGAT GGTCAAGAAC CCGAACATCG GCTCCACCGC CGCGGCGATC GACTACCTGC AGCTCCGCAA CACCCTGCTG CTCGTGCGGG ACCACTCCGG CCGCTACCAC GCGTTCATCC GGTTCTGCAT CGCGCTGTGG CATCTCGCCT CGGGCGCGGT CGTCCCGGCC CGGCGCGGCC CCTACTGGAA CCTCGAAGGA CGTGTCCGCG GGCTTCTGGA CTTCGTCCGC GGGCGTTTCG GCCCTCCCCC GCCGCATCTA CTCGTCAAGC GCTGA
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Protein sequence | MQPLSVVIVH RDQPKRLVDT IDAFRAQDVP VAITIVDNGS AVMPPVEAAD VTVVLAGSNL GFGPAANVGY RAFLADADAG EWVVLAPHDA LPEPTCLSHM LGVLAQQPRA GLACADVGDG ATPVIDPYFG GILMPASVDE GWEPAGHPHG TLMFARRVCL DEIGIFDERY FAYCEEADLA LRARSAGWES GLVRGAMVKN PNIGSTAAAI DYLQLRNTLL LVRDHSGRYH AFIRFCIALW HLASGAVVPA RRGPYWNLEG RVRGLLDFVR GRFGPPPPHL LVKR
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