| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6795 |
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| Symbol | |
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| ID | 5675108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8279755 |
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| End bp | 8282424 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641245644 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001511035 |
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| Protein GI | 158318527 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.26152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCCAAG GGAAGCTCAT CGGGCGGGAC GAGGAACGGT CCCGGCTCCT GGCGTTGCTC
GGCGACGCGG CCGGGCCGGT CCTGGTGCTC CGGGGGGAGG CCGGCCTCGG CAAGACGGCG
TTGCTGGACG AGCTGGCCGC GGCGGCGGCC GGGTTCCGGG TCGTGCGCTG CGCGGGGGCG
GAGGCGGAGC GGGACCTGGC GTTCGCCGGG CTGCATCAGC TGGTCTTTCC GTTGCTGCCC
GACGCGGCAG GCCTGGATCC CGCGCACCGG GCGGTGATCG ACGCGGCGTT CACCGGTACG
GCCGCCGCCG CGCCGCAGGT GATGGCGCTC GGCATCGCCG TGCTGGACCT GCTGACCCTC
GTCTCGGCGG CCAGCCCGCT GCTGCTGGTC GTCGACGACG GCCAGTGGCT GGACGTACCC
AGCACACAGG TCCTCGCGTT CACCGCGCGG CGCCTCGCGG GTACAGCCGT GCGGGTGGCA
GTCGCGGTGC GCCCCGAGGC GTCGTCACCG CTCGACGGGG CTGGGCTGCC GGAGCTGAAC
CTGGAGCCGC TGACCGAGCA GGTTTCCACC CGGTTGCTGG ACCTGCAGCA GGCCGGGCTC
AGCCCGTACC ACCGGAACAT GATTCTGAAG ACCGCGGCTG GCAACCCGTT GGCGCTGATC
GAGCTGCCCC GGGCGGAACT GCTGGACACC GGCACGATCG CGCTGCCGCG GCGGCTGGAG
AAGATCTACG GCACGCGGCT GCGCGGCCTG CCGGCGACCG AGCGCGGCGA GCTGCTGCTG
GCGGCGCTGG ACGGCACCGG TGCCGGATCG GCGCGCAGGG TCGGCGCGGC CCGGTACCGG
ATGCGCGGCG TCGGCCGGGC GGTCGAGGCG GGCCTGCTGG CCCCGGACCC GGCCACCGGG
GAGCCGGTGT TCCGGCATCC CCTCGTCCGC TCGGCCGTCG TGCAGGCCGC GACCCCGCAC
GAACGCCGGG CCGCCCACGC TGATCTCGCC GAGCTGCACC GCGACAGCCC GGAACGGCGG
GCCGTGCACC TGGCCGCCGC CACCGTCGAC CCGGACGACG ACGTCGCCGC GGCCCTCGAA
GAGGCGGCCG TCTCGGCTTC GCGGCGCGGC GGTGCGGCGA CCGCGATCAC CTGGCTGACC
CGCGCCGCGG AACTCAGCCG CCGACCCGCC GACCGGTCCC GGCGGCTGGC CGACGCCGCG
TACGTCGCCG GGCAGGCCGG TCTGCTCGAC ACCGCACAGG GCCTCGCGGA GGACGCCGCG
TTGGACGGCC CAGCCGCGGA GATCACCGCA GGGTACGTGG CGCTTTACCG CGAGGGCGAG
GTCGTTGCGA ATCACCGGCG GATCACCGCG CTGCTGGAGT CCGGAGTCGC CGACGAACAG
CTGACCGAAC GTGCGCTGAG CCTGATGCTG GCGATCAGCC AGTTCGCTGC CGACCCGGTC
CGCTGGGAGC GCACCGACGC GCTGTTCGAC CGGTTCGGCG ACCGGATGGG CCCGTCGACG
GCGATTGCCC GGGACGCGTG GGGCGACCTG GTGAAGCGCG GTCACGGCAT ACCGGAACGG
ATCGCTGACG CCCTCGCCGA TCCCGCCGCT CGCGCGCCGT GGGACGTGAT GCGGCTGACC
GTCTCCGCCT ACTATGTGGG CGTTCTCGGC GACCACCGGG AGCTGCTGCT GCGGACGGTC
GACCGGGAGA CGGAGGCCGG CGCGGTCACC AGCGTGATGG TGCTGCTCCA GATGGTCATG
CTTGACCAGA TCGGCGCCGG CGCGTGGGCG GAGGCTGAGC GCACCGGCCG TCGCGGCCTG
GACCTGACCG CCGGGCACGG GTACACGCTG TTCGCTCAGT CGTTCCGGGC GTTCCTCGGC
CTGCTGGCCG CCTACCGCGG TGATCTGGCC CGAGCCCGTG ACCTGCAGGC GGCCGTGGAC
GCCTGGGGAC GGCCGCGCGG GCTGGGGTTC CTGACCGAGT ACGCGGAGGC GATCGGCGCT
GCCGCGGCAC TGAGCGAAGG CGAGTACGAG ACCGCGTACG CCTACGCCGC TGGAATCACC
GCCCCGGGCA CGTTCTCCCG CTACTCGCAG CAGGCCACCC GCACGCTGCT CGACCTGGTC
GAGGCCGCCG CGCACACCGG CCGGCACGAC GCCGCCCTCG CGCACGCCGA AGCCGCCCGG
GATGCGGGCC TGCCGGCGCT GTCGCCGCGT CTGGCGCTGC TCACCGCCGG GGCACTGGCG
ATCACCGCGC CGCGGGAGGA GGCCGGTGCG CTGTTCGCCG CCGCGGTCGC GCATCCCGCT
GGTCGCGCGT TCCCGTTCGA GCTGGCGCGG ATCCGTCTGG CGTACGGCGC GTGGCTGCGG
CGCGCCCGCG AGCTGACTTC GGCGCGCCAG ACGCTGACCG AGGCACTCGG CGCGTTCGAC
CTGCTCGGCG CCGCGACCTG GGCCGAACGG GCCCGAGCCG AACTACGCGC CGCCGGCAGG
CCGACCCGCG CGGACCGCGC CGCGGTGGCC GCGCTGACCC CGCAGGAACG GCAGATCGCC
GAGCTGGCCG CGACCGGGCT GAGCAACCGG GAGATCGGTG CCCGGCTGTT CCTGTCACCG
CGCACGGTCG GTGCGCATCT GTACAAGGTC TTCCCGAAGC TCGGCATCAC GTCGCGGGCC
TCGCTACGTG ACGCGCTCCA GAGCGGCTGA
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| Protein sequence | MGQGKLIGRD EERSRLLALL GDAAGPVLVL RGEAGLGKTA LLDELAAAAA GFRVVRCAGA
EAERDLAFAG LHQLVFPLLP DAAGLDPAHR AVIDAAFTGT AAAAPQVMAL GIAVLDLLTL
VSAASPLLLV VDDGQWLDVP STQVLAFTAR RLAGTAVRVA VAVRPEASSP LDGAGLPELN
LEPLTEQVST RLLDLQQAGL SPYHRNMILK TAAGNPLALI ELPRAELLDT GTIALPRRLE
KIYGTRLRGL PATERGELLL AALDGTGAGS ARRVGAARYR MRGVGRAVEA GLLAPDPATG
EPVFRHPLVR SAVVQAATPH ERRAAHADLA ELHRDSPERR AVHLAAATVD PDDDVAAALE
EAAVSASRRG GAATAITWLT RAAELSRRPA DRSRRLADAA YVAGQAGLLD TAQGLAEDAA
LDGPAAEITA GYVALYREGE VVANHRRITA LLESGVADEQ LTERALSLML AISQFAADPV
RWERTDALFD RFGDRMGPST AIARDAWGDL VKRGHGIPER IADALADPAA RAPWDVMRLT
VSAYYVGVLG DHRELLLRTV DRETEAGAVT SVMVLLQMVM LDQIGAGAWA EAERTGRRGL
DLTAGHGYTL FAQSFRAFLG LLAAYRGDLA RARDLQAAVD AWGRPRGLGF LTEYAEAIGA
AAALSEGEYE TAYAYAAGIT APGTFSRYSQ QATRTLLDLV EAAAHTGRHD AALAHAEAAR
DAGLPALSPR LALLTAGALA ITAPREEAGA LFAAAVAHPA GRAFPFELAR IRLAYGAWLR
RARELTSARQ TLTEALGAFD LLGAATWAER ARAELRAAGR PTRADRAAVA ALTPQERQIA
ELAATGLSNR EIGARLFLSP RTVGAHLYKV FPKLGITSRA SLRDALQSG
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