| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6792 |
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| Symbol | |
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| ID | 5675105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8274330 |
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| End bp | 8276087 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245641 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_001511032 |
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| Protein GI | 158318524 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCTGG ATGCCGCGGA CGCCGGCGAG GAGTACCTGG CGGCGTTGGA GGAGATCGAG
AGCTACGCCC GTGCCGCCCG CCTGCTCACC CTGGAATCGC CGCCGCAGCA GGTGGCTTTC
CGTCGCTGGT ACGTGGGATC GCTGGTGACA CAGCTCCGGA TCGCTGCCCG GGGCGGCGTG
CCCGAGCCGG TGCGTACCTT CGAGCAGTAT CTGCTGGACA CTCTCGACGA GGTGGTCAGA
ACCCAACGCA CGGCCGAACG GGCCGCGCGG CTGCAGGGGG TCACCGCGGC CCTCGCTCTG
GCGACGACGC CGGAGAAAGT CGCTGAGGTG GTGGTTTCCG AAGGGGTGAC CGCCCTGGGC
GCGTTCGGGG GCGGCCTGCT GGTCGCGCGG GACGCTGGGC GGCTCGCGGT CCCCGGCACC
GTCGGGTACC GCGAGGAGGT GGTCTCGATG CTGCGTGCGG AACGGCTCGA CGACCGCCTG
CCGGCCGCCG ATGCGATCCG CGGCGGTATG CCGGTCTGGT TGGAATCCCG CCAGGACCGC
GACTCGCGCT ACCCGGAGCT GGCCGAGCGG GAACCGAATG TGGTGTCGAT GTGTGCGTTG
CCGCTGCTCG TCGGTGACCG TGTGCTCGGG GCGTTGCGGT TCTCCTTCGA CCACCCCCGG
CTTTTCGACG CTGACGAACG TGACTTTGTC CTGGCGCTGG CGGCGCAGAC CGCGCTGGCC
GTGGAACGGG CCCGGCTGTT CGCCGCCGAG CGCCGTGCGC TCGAACGCAG CGCTTTCCTC
GCGACGCTCG CCGACCGGAT CACCACCACG CTGGACCCAC GGCGCGTCCT CGAGCAGACC
ACCGACCTGT TGGTGCCCCG GTACGCCGAA CGGGCCGTCG CGGTCCTGAC GGACGAGCCG
ATGACCTCCA TCGGCGATCC CTCCCCGAGG GAACTTGCCC TGATGAGGGC GGTTACTCAG
ACCGGAACCA CGACCACCAC CACCACCACC GACGGCGACG GCGACGAGAC CGTACTGGTT
GTTCCGCTCA CCGTTGGCGG CCGTACGGTC GCCGTCCTCG CTGTGCTCTG TCACGAGGAC
AGCCCACGCG CCCGCGACGA GCAGGATGCC ATCGAGGAGG TCGCCCGGCG TGCGGCCGTC
GCGGTGGGCA ACGCTCAGCT GTACGAACAG GAACGGCGCA CCGCTCTCAC CCTGCAACGC
AGCCTTCTCC CGCAGCGACT GCCGACGATC GGTGGGCTGT CGTTCGCCTG GCGCTACCTT
CCTGGCAGCG CCGGCGCCCT GGTCGGTGGC GACTGGTACG ACGTCCTTCC CCTGGACGAC
GGTCGGGTGG CGCTTGTCAT CGGGGACGTC ATGGGGCACG GCATCCAGGC CGCCGCGACC
GTGGGCCAGC TGCGGGCCTC CGCCCGCGCA CACATCACCA CCGATCCCAG TCCGTCGGCC
GTACTGGCCC GGCTCGATGA GGCAGCGAAT CGTCTCGAGC AGGGACAGAT CGCCACGGCG
GCGCTTGCCG TGCTGGACCC CGCGAACGCG CGGCTCACCC TGGCATCCGC CGGGCACCTG
CCACCGCGGC AGCTTCCCCC GACCAGCTGT GCGACCAGGC CCTGGCCGTA CTCGGCCGGC
TGGCCGGCCA CGACGACGAC ACCGCCCTGC TCGCCGTCAT GGTCAACACC CTGGGCCCCG
CATGATCTCG CCGAGCTGGA GGTCATTGGC CCAACCGGCG ATCTCAGCGT GCTCGCGGTA
GTGGCGGACT CGCGGTAG
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| Protein sequence | MPLDAADAGE EYLAALEEIE SYARAARLLT LESPPQQVAF RRWYVGSLVT QLRIAARGGV
PEPVRTFEQY LLDTLDEVVR TQRTAERAAR LQGVTAALAL ATTPEKVAEV VVSEGVTALG
AFGGGLLVAR DAGRLAVPGT VGYREEVVSM LRAERLDDRL PAADAIRGGM PVWLESRQDR
DSRYPELAER EPNVVSMCAL PLLVGDRVLG ALRFSFDHPR LFDADERDFV LALAAQTALA
VERARLFAAE RRALERSAFL ATLADRITTT LDPRRVLEQT TDLLVPRYAE RAVAVLTDEP
MTSIGDPSPR ELALMRAVTQ TGTTTTTTTT DGDGDETVLV VPLTVGGRTV AVLAVLCHED
SPRARDEQDA IEEVARRAAV AVGNAQLYEQ ERRTALTLQR SLLPQRLPTI GGLSFAWRYL
PGSAGALVGG DWYDVLPLDD GRVALVIGDV MGHGIQAAAT VGQLRASARA HITTDPSPSA
VLARLDEAAN RLEQGQIATA ALAVLDPANA RLTLASAGHL PPRQLPPTSC ATRPWPYSAG
WPATTTTPPC SPSWSTPWAP HDLAELEVIG PTGDLSVLAV VADSR
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