| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6751 |
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| Symbol | |
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| ID | 5675064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8210850 |
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| End bp | 8212472 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245600 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001510991 |
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| Protein GI | 158318483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.136114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGTGG CGCGTGGCGA GGCTGGCTGG GATTTCTTCA TCTCTTACAC CGCCGTGGAC
ACAGCCTGGG CGGAGTGGAT CGCCTGGCAG TTAGAAGACG CTGGCTACCG GGTGCTGATC
CAGGCGTGGG ACTCCGTGCC CGGGTCGAAC TGGGCGGTCC GCATACAACA GGGGACGACC
GAGTCTGACC GCACCATCGC TGTGCTCTCG GCCTCCTACC TGCGGTCGGT CTACGGGCAA
AACGAGTGGC ATGCCGCCCA CGCCGCCGAC CCCGGCGGCT TCGCCCGCAC GTTGCTCCCC
ATCCGGGTGG AGGACTGCCC CCGCCCGGGA CTGCTCGGAC AGATCGTGTC GATCGATCTG
TTCGGCCATC CCGCCGACGT CGCCCGCCAG CACCTCCTCG ACGCGATCAG CACAGCACGG
GCGGGGCGCG CGAAACCCAC CGCCGCACCC GCCTTCCCCC CACGCCCGGC CCTACCCCCA
CAGCAGCCCT CAGCAAGAAC GGCACCCCCC TTCCCCGGCC CGGACCCGAC GGCCTCCCTC
GACCAGCCCG CCCTCCGCAC GCACGCCCGA TCCGATCGCC TCCTCCATGG GCCGCAGCGC
CGCGTTTCTC TCGCGGTGGT GCTGCTCGTC ATCACCGGCA CCGTCTTCCT TGCCAGTTCC
GCGCGGGACA GGAATCCGAG CGCGACCAGC GCCCACTCCG CTGCGCCACC AACGTCGGCT
CCCACACCCA GCCTGTCGGG CTCACCCTTA CGCGACCACA CCGACTCGGT GCGGTCGGTG
GCGTTCTCCC GGGACGGACG CACGCTAGCC AGCGCCAGCC AGGACGGCAC GGCGCGGCTG
TGGGACATCG CCGAGCGGAC CTCCCAACCG TTGACCGGCC GCATCGCAGT GTGGTCGGTG
GCGTTCTCCC CAGACAAGCA CACGCTGGCC AGCGCCAACG GCGACAGCAC GGTGCAGTTG
TGGGACGTGG CCGAGGGGAC CCTCCCCCAC CCGGTGGCTT CCCTGCCCGG CCACAGCGAC
GCGGTGGGAT CGGTGGCGTT CTCCCCGGAC GGACGCACGC TGGCCAGCGC CAGCGACGAC
CACACAGTGC GACTGTGGGA CGTGGCCACG GGGACCACCA CCCACACGTT GACCGACCAC
ACCGGCCCCG TGAACTCGGT GGCGTTCTCC CGGGACGGGC GCACGCTGGC CAGCGCCAGC
GACGACCACA CGGTGCGACT GTGGGATGTG GCCGAGGGGA CCCTCCTCCG CACCTTGCCC
GGCCACACCG AGCCAGTGAT GTCGGTGGCG TTCTCCCCGG ACAGACGCAC GCTGGCCAGC
GCCAGCCAGG ACAACACCGT GCGGTTGTGG GATGTGGCCG CGCGGACCGC CCCCCGCCTG
GTGGGCTCTC TGTCCGACCA CACCCACTGG GTGATGTCGG TGGCGTTCTC TCCCGACGGG
CGCATCCTGG CCAGCGCCAG CCAGGACCGC ACAGTGCGGC TGTGGGACGT GGCCGCGCGG
ACCACCACCC ACACGTTGAC CGGCCACACC GGCCCCGTGT TCTCGGTGGC GTTCTCCCTG
GACGGGCGCA CTCTGGCCAG CGCCAGCGAC GACAACACGG TGCGACTGTG GGACATGAGC
TGA
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| Protein sequence | MGVARGEAGW DFFISYTAVD TAWAEWIAWQ LEDAGYRVLI QAWDSVPGSN WAVRIQQGTT
ESDRTIAVLS ASYLRSVYGQ NEWHAAHAAD PGGFARTLLP IRVEDCPRPG LLGQIVSIDL
FGHPADVARQ HLLDAISTAR AGRAKPTAAP AFPPRPALPP QQPSARTAPP FPGPDPTASL
DQPALRTHAR SDRLLHGPQR RVSLAVVLLV ITGTVFLASS ARDRNPSATS AHSAAPPTSA
PTPSLSGSPL RDHTDSVRSV AFSRDGRTLA SASQDGTARL WDIAERTSQP LTGRIAVWSV
AFSPDKHTLA SANGDSTVQL WDVAEGTLPH PVASLPGHSD AVGSVAFSPD GRTLASASDD
HTVRLWDVAT GTTTHTLTDH TGPVNSVAFS RDGRTLASAS DDHTVRLWDV AEGTLLRTLP
GHTEPVMSVA FSPDRRTLAS ASQDNTVRLW DVAARTAPRL VGSLSDHTHW VMSVAFSPDG
RILASASQDR TVRLWDVAAR TTTHTLTGHT GPVFSVAFSL DGRTLASASD DNTVRLWDMS
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