Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6734 |
Symbol | |
ID | 5675047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8189335 |
End bp | 8190492 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245583 |
Product | ATPase |
Protein accession | YP_001510974 |
Protein GI | 158318466 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0140161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0815898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC CTGCCCCGAC CCCCTCCGCC CCCGCCGCCT TTCGCCTAGC ACCAGGCGGA CTGCACGAAA TGGTCGCCCG CTACCTGCTC GATCACCCTT CCGCATCCCA CACACCGACC GCCGTGGCGA AGGCGTTGAC CCGTAGCAAC GGCGCCGTGG GCAACGCGCT GCACCGTCTG GCCGAGGCCG GGCAGGCGAC GTTGACCAGC ACCAAACCCC GCCGGTACAC GGCCACCCCC ACCACGCGGG ACGCATTCGG ACGGACCGGC ATACCGCCCG TGGCAAGGCC CCGCCCGGCC CCGGCACCGC CCCCGGCGGC GGTGCCGAAG CCCCGGCCGG CCCTTCCGCC CACGACGCCG GATGGGGGGA TCATCCGCCC GTCGGGGCAG GTGTACCGGC CCCGGAAGCT GGCGGACCTG CCCGACGTGG AAGTCCTGCG CAAGCTACGC ACGGCCGAAG TACCGGTCCT GCTCTACGGC CCGCCCGGTA CGGGGAAGAC GAGCGTGATC GAGGCCGCCT TCGGCGACGA TCTGATCACG ATCGCGGGGG ATGGTGACAC CCAGGTCGGT GACCTGATCG GTGAGTACAC CCAGACCCCC GACGGCCGGT ACGAGTTCGT CTACGGGCCG CTCATCACCG CCATGCAGGA GGGGAAGGTC CTCCTCGTCG ACGACGCCAC TCTGATCAGC CCGGCGGTGC TCGCGGTGAT GTACCCGGCG ATGGACGGCC GGAAAAGGAT CATCGTGAAG GCGCACAAGG GCGAGGCGGT AGAAGCAGCC CCCGGCTTCT ACGTGATCGC TGGACACAAC CCGGGTGTCC ACGGGGCGAT CTTGAGCGAA GCGTTGTCAT CCCGTTTCGC GGTGCAGGTC GAAGTGTCGA CCGACTTCGA TCTCGCCACC AAACTCAAGA TCGACAGCAG GGCGGTGCGG GTCGCGCGGA ACCTCGCGCG GCGCCGCGAG TCCGGGGAGA TCGGCTGGTC CCCGCAGCTG CGAGAGCTGA TCGCCTTCCA GAAGATCGCG GACGTGTTGG GTGTCCCGGC GGCGGCAGCG AACCTGATGG GGATCGCGCC GGCCGAGGAC CGGCCGGTGG TCGCGGACAC GGTCGAGAAG GTCTTCGGGA TCAAGCTCGC GCCCCTCGCC CTCGGCAAGC AGATCTAA
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Protein sequence | MSSPAPTPSA PAAFRLAPGG LHEMVARYLL DHPSASHTPT AVAKALTRSN GAVGNALHRL AEAGQATLTS TKPRRYTATP TTRDAFGRTG IPPVARPRPA PAPPPAAVPK PRPALPPTTP DGGIIRPSGQ VYRPRKLADL PDVEVLRKLR TAEVPVLLYG PPGTGKTSVI EAAFGDDLIT IAGDGDTQVG DLIGEYTQTP DGRYEFVYGP LITAMQEGKV LLVDDATLIS PAVLAVMYPA MDGRKRIIVK AHKGEAVEAA PGFYVIAGHN PGVHGAILSE ALSSRFAVQV EVSTDFDLAT KLKIDSRAVR VARNLARRRE SGEIGWSPQL RELIAFQKIA DVLGVPAAAA NLMGIAPAED RPVVADTVEK VFGIKLAPLA LGKQI
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