Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6710 |
Symbol | |
ID | 5675023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8151295 |
End bp | 8152545 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245558 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001510950 |
Protein GI | 158318442 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.614277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCGGA GCGTGACTCT CGATCGGTGG CGGGATCGGT ACGCCCAGCG TGCCCAGGGG ATGATCGCGA GCGAGGTTCG GGCGTTGTTC GCGGTGGCAT CCCGTCCCGA GATCGTGTCG CTCGCCGGGG GGATGCCTCC GGTCGACGTC CTTCCGTTGG AGGCGGTCGC GGCGACGGTG TCGGAGCTGG TGTTGAGCCG GGGTGCGGTG GCGCTTCAGT ACGGCTCGGC GCAGGGTGAT CCGGGATTGC GGGCGCGGAT CTGTGACGTG ATGGCGATGG AGGGCATCAC CGACACCCAC CCGGACAACG TGGTGGTGAC CGCCGGGTCG CAGCAGGCGC TGGACCTGCT CACCCGCGTG TTCATCGACC CGGGCGACGT GGTCGTCACC GAGGGGCCGA CCTACGTCAC GGCGATCAAC ACGTTCGCGG CCTACCAGGC GCGGATCGTG CACGTGCCGA TGGACGGCGA CGGCCTGTCG CCGTCCGCGC TCGCGGAGAC GTTGAGCCGC CTGGCCGCCG AGGGTGCCCG GGTGAAGCTG CTCTACACGG TGCCGACGTT TCAGAATCCC GGCGGGATCA CGCTGACCCC GCCACGGCGG GCCGAGGTGA TCGAGCTGTG CCGCCGGGCG GGGGTACTCG TGGTCGAGGA CAACCCGTAC GGGCTGCTGT CGTTCACAGG TGAGCCGGTG CGGGCGATGC GCGCCGACGC CCCGGATGAC GTGGTGTATC TGGGTTCGTT CTCGAAGACG TTGGCGCCGG GGCTGCGGGT CGGGTGGGCG CTGGCACCGC CTGCGGTGAC CGCCCGGCTG GTGTTGGCGG CGGAGTCGGC GATCCTGTCG CAGTCGATGT TCACGCAGCT GGCCGTTGAG CGGTATCTGG CGACCCAGCC GTGGGCGGAG CAGGTGAAGG CGTTCCGGGA GATGTACCGG GAGCGCCGCG ACGCCATGCT CGACGCCCTG GACGAGGTGA TGCCGCCCGG TGCGAGCTGG ACCCGCCCTG ACGGGGGGTT TTTCGTCTGG TTGACGCTGC CGGACGGGGT AAACACGAAG GCGATGTTGC CGCGGGCGAT CGCTGCCCGG GTCGCCTACG TTCCCGGGAT CGGGTTCTAC GCCGACGGCT CGGGTGGTAC CAGCATGCGG TTGTCGTACT GCTACCCGCC GCCGGAGCGT ATCCGCGAGG GGGTCGGCCG GTTGGGCGCG GTCGTGCGGG ATGAGCTGGC CCTGCGTGAC ACCTTCGGTT CCCGTCCCTG A
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Protein sequence | MSRSVTLDRW RDRYAQRAQG MIASEVRALF AVASRPEIVS LAGGMPPVDV LPLEAVAATV SELVLSRGAV ALQYGSAQGD PGLRARICDV MAMEGITDTH PDNVVVTAGS QQALDLLTRV FIDPGDVVVT EGPTYVTAIN TFAAYQARIV HVPMDGDGLS PSALAETLSR LAAEGARVKL LYTVPTFQNP GGITLTPPRR AEVIELCRRA GVLVVEDNPY GLLSFTGEPV RAMRADAPDD VVYLGSFSKT LAPGLRVGWA LAPPAVTARL VLAAESAILS QSMFTQLAVE RYLATQPWAE QVKAFREMYR ERRDAMLDAL DEVMPPGASW TRPDGGFFVW LTLPDGVNTK AMLPRAIAAR VAYVPGIGFY ADGSGGTSMR LSYCYPPPER IREGVGRLGA VVRDELALRD TFGSRP
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