Gene Franean1_6692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6692 
Symbol 
ID5675005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8128294 
End bp8129076 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID641245540 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_001510932 
Protein GI158318424 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGAC AGGGACTCCC GTTGACGGAC ATGCGTCGAC CCGGCGGGCA ACTGGTGCGC 
TCGACCTCTG ACCGGCTGGT GGGCCCGCCC GGTTCGGAGC GGGCCCGCAC CGAGACCATC
CGGTACACCG TCGCCGGAGC GGCGGGGGTC CTGCTCACGG TGCTGCTGGG CGCCGTCGTC
CTCCGGAGTG GAACGCCGCT CGGGCTCGAT GCCGGGTGGC ACCGGTGGGT GTTGGCTCAC
CGTAACCCCG GGCTGTCCGA TGTCGCGGTC GCCGTCACCG ACACCGGCGT CGGTGCCTGC
GCCTACTGTC TTGCCGCGGT CGCCGGCGCC CTGGCGGTGC CGCGGTGGTC GCGGTGGTGG
CGGTGGTGGC TGGGCGCCGT CGCCGGGGTC GTGGCGCTGC TGCTGGGACA GCTGTTGAGG
ACCTCGCTGG CGGTCATCGT CGGCCGGGCG CGACCGCCGG TGGCGGACTG GATAACCTAT
CCGTCCGGCT TCGCGTTTCC GTCCGGCCAC ACGACCACCT CGGCGCTGGT CGCCGCGGGT
CTCGCCGCGG TGCTGTACCG CCGGGCCCGC AGGCGCTCCA CCAGGGTCGC GGCTGTCGCC
GTCCCGGGCA TCTGGGCGTT CACTGTGGGG CTCAGCCGGA TCTACCTCGG GGTGCACTGG
CCCACTGATG TTTTCGCCGG ATGGCTGTTG GCCACAGTCC TCGCTGTTGT CTGCCTGCCG
TTGCTGGGCG CCCTGTTCGC GTGGATCGGC CGGGATCAGC CAGACCGGCC GGACCCCCGC
TGA
 
Protein sequence
MCRQGLPLTD MRRPGGQLVR STSDRLVGPP GSERARTETI RYTVAGAAGV LLTVLLGAVV 
LRSGTPLGLD AGWHRWVLAH RNPGLSDVAV AVTDTGVGAC AYCLAAVAGA LAVPRWSRWW
RWWLGAVAGV VALLLGQLLR TSLAVIVGRA RPPVADWITY PSGFAFPSGH TTTSALVAAG
LAAVLYRRAR RRSTRVAAVA VPGIWAFTVG LSRIYLGVHW PTDVFAGWLL ATVLAVVCLP
LLGALFAWIG RDQPDRPDPR