Gene Franean1_6680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6680 
Symbol 
ID5674995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8115978 
End bp8117111 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content76% 
IMG OID641245531 
ProductATPase BadF/BadG/BcrA/BcrD type 
Protein accessionYP_001510923 
Protein GI158318415 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.828695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAACC TGCAGCCAGA GAACTCCAGG CCGTTGATCA GCCTGCCACC GTCCCTGCGG 
CCGCCCCCGG AGCCTCCGCC GTCAGCGGGG CCCCTGCCGT CAGCGGAGTC CCTGCCGGAG
GCGGCGCCTC ATGCTGGTCT CCCCCGCCCC TTCCTGCTCG GCGTGGACGG CGGCGGTACC
AAGACCACGG CCGCCGTCCT CGACCTGCGG CGGTCGACGC TGACCACGGC CACCGCGGGC
CCGAGCAATC TCGACGTCGT CGGCCTCGAC GGCGCCGCCG CCGCGATCAT GGAGGCCGTC
CGTGGCGCGC TCGGCCAGGC GGGTGCCGCT GCAGACGAGG TGGCCGCCGC GGTGCTCGCG
GTGGCCAGCG CCGACACCGA CGACAACCAG GAGGCCCTCC GGAGCCGGCT GACCGGCCTT
CGGCCGGTCG GGAGCACGCT GGTGCTCAAC GACGTCGTCG CGGCCTGGGC TGCCGGCACG
CTGGGCCGCC CCGGTGTCGC CGTCATCAGT GGTACGGGCA GCAACACCCT GGGGGTCGCC
GCCGACGGGC GCACCTGGCG ATGCGGCGGC TGGGGGCACC TGCTGGGCGA CGAGGGCTCG
GGGTACTGGA TCGGCCTGCA CGGGATGCGC GCGGCCGTCG AGTTCCGGGA CGGGCGCGCC
CCCTGGTCGG CGCTCGTGCC CCGCCTGCTC GCCTTCTACC ATCTCGACCT GGTCGAGAGC
GTCGACGATC TCGTCTACGG CAGCCTCGAC AAGGCGGGGA TCGCCGCGTT CGCCGTCGAG
GTCGCCGCCG CCGCGGCCGC CGGTGACGCC GTCGCCCACC GGATCCTGAC GGACGCCGGC
CGGCTGCTGG CCGACCAGGT CCGCACAGTG ATCGACCGGC TCGGGCTGAC GGGCGAGTTC
CCCGTCTCGC TCGTGGGCGG CACGTTCAAC TCCGGGCCGC CGTTCCTGGA CGCGTTCACC
GCCCGCGTCA CCAGCGCCAG CCCGGGCGCG CGTCTCGTCC GGCCGCGGAT GTCCCCGGCC
GCCGGGGCCG TCCTGCTGGC GGCGCGGCTG GCGGGCACCG AGCAGCTGGT GGGCTGGGCC
GGTATCGGCG ATGCCCCGGG CACCCCCACG GAGGAACTGG TCCGCCCGCG CTGA
 
Protein sequence
MPNLQPENSR PLISLPPSLR PPPEPPPSAG PLPSAESLPE AAPHAGLPRP FLLGVDGGGT 
KTTAAVLDLR RSTLTTATAG PSNLDVVGLD GAAAAIMEAV RGALGQAGAA ADEVAAAVLA
VASADTDDNQ EALRSRLTGL RPVGSTLVLN DVVAAWAAGT LGRPGVAVIS GTGSNTLGVA
ADGRTWRCGG WGHLLGDEGS GYWIGLHGMR AAVEFRDGRA PWSALVPRLL AFYHLDLVES
VDDLVYGSLD KAGIAAFAVE VAAAAAAGDA VAHRILTDAG RLLADQVRTV IDRLGLTGEF
PVSLVGGTFN SGPPFLDAFT ARVTSASPGA RLVRPRMSPA AGAVLLAARL AGTEQLVGWA
GIGDAPGTPT EELVRPR