Gene Franean1_6638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6638 
Symbol 
ID5674953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8069126 
End bp8069791 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content74% 
IMG OID641245489 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_001510881 
Protein GI158318373 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG GGATTCTGGG CACCGGGGCG CTGGCCGAGG GGTTGGGGCG GGCCTGGGTC 
CAGGCCGGGC ACGAGGTGGT GATCGGCGGT CGATCGCGCG CCAAGGCGGA TGCGCTCGCG
GAACGCCTGG GCGCAACGAC GCGGGCGGCC GCCCCACGCG CGGCTGTCGC CGAGCGCGAC
GCGGTACTGC TGGCCGTGCT GTGGACCGGT GTCGAGGATG TCCTGCGCAG CGCGGGCGCG
GACGAGGGAA CGCTGGCGGG AGTTCCGTTG ATCGACCCGA CAAACGCGGT CGAGCACGGC
GTCGGCGTCC TGCTCACCGA GCAGGGCGAC TCGGCCGCGG CCCGGATCGC CGCGGCGGCT
CCTGGAGCGC AGGTCGTGAA GGCGTTCCAC CTTTATCCCG CCGCCCAGTG GGCACGGCCG
CCGGCCGGCG GCGCCGGTGC GGACACATCA GCGCCCACAG TGGCGATCTG CGGCGATGAC
GAGGCGGCGC TGCGGGTCGT GAGCGATCTC GTCCGGGACG TCGGCGGCGT ACCGGCCACG
CTGGGAACGC TGGTCCGCGC ACGTCAGCTC GAGGAGGTCG CGGGCTTCGT CATCGGGCTG
GCGTTCGCGG GCTTTGATCC GGCTTCGGCC ATCCCCCGTG TACCGACGGG AACAGTGTCC
GCCTAG
 
Protein sequence
MRIGILGTGA LAEGLGRAWV QAGHEVVIGG RSRAKADALA ERLGATTRAA APRAAVAERD 
AVLLAVLWTG VEDVLRSAGA DEGTLAGVPL IDPTNAVEHG VGVLLTEQGD SAAARIAAAA
PGAQVVKAFH LYPAAQWARP PAGGAGADTS APTVAICGDD EAALRVVSDL VRDVGGVPAT
LGTLVRARQL EEVAGFVIGL AFAGFDPASA IPRVPTGTVS A