| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6604 |
|---|
| Symbol | |
|---|
| ID | 5674919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8038103 |
|---|
| End bp | 8038678 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641245455 |
|---|
| Product | HhH-GPD family protein |
|---|
| Protein accession | YP_001510847 |
|---|
| Protein GI | 158318339 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR03252] uncharacterized HhH-GPD family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGACTGC ACCTGAGCCA GATCGAAGAG GCCGACGAGC TGCTGACGAA CGACCCACTG
GCGCTGCTGA TCGGCATGGT TCTGGACCAG CAGATCCCGT TGGAGCGGGC GTTCGCGGCG
CCGTACGAGC TGACGAAACG GCTCGGGCGT TCGCTCGACG TCACCGAGCT TGCCTCCTAC
GACCCGGACG AGCTGGCCTC GGTCTTCTCC CAGCAGCCGG CGCTGCACCG GTTCCCCGGT
TCGATGGCCA AGCGGGTGCA GGCGCTCTGT CAACTGATCG TCGACAGGTA CAACGGCGAC
CCGGCCGCGG TGTGGGCGAC CGCCGCTGAC GGCAAGCAGC TGCTCCGCCA GATTAGCGCC
CTGCCCGGCT TTGGCCAGCA GAAGGCCAAG ATCTTCATTG CGCTGCTCGG CAAGCAGCTC
GCCGTCACCC CACCCGGCTG GCGCGAGGCA AGCGACCCCT TCAGCGAGGA TGGCAGCCTC
CGCTCCATTG CCGACATCAC CAGCCCCGAA ACCCGCATCC AGGTCCGCGA CTTCAAGAAG
CAGCTGAAGG CTGCGGCGAA GACCGCAGCC TCTTGA
|
|---|
| Protein sequence | MGLHLSQIEE ADELLTNDPL ALLIGMVLDQ QIPLERAFAA PYELTKRLGR SLDVTELASY
DPDELASVFS QQPALHRFPG SMAKRVQALC QLIVDRYNGD PAAVWATAAD GKQLLRQISA
LPGFGQQKAK IFIALLGKQL AVTPPGWREA SDPFSEDGSL RSIADITSPE TRIQVRDFKK
QLKAAAKTAA S
|
|---|
| |