| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6588 |
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| Symbol | |
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| ID | 5674903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8017878 |
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| End bp | 8018567 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245439 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001510831 |
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| Protein GI | 158318323 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.13217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGTC CCGTCCGGGT CCTCGTCGTT GACGACGAGG AGGCGATCAC CGATCTCGTC
GCCATGGCGC TGCGCTACGA GGGCTTCGAC GTGAGCGCCG CGCACTCGGG GCAGGCGGCG
CTCACGCAGG TCTCGCGGGA GCCGCCCGAC CTGCTCGTGC TGGACGTCAT GCTGCCCGAC
ATCGACGGCT TCGCCGTCTG CCAGCGGCTG CGCAACGCCG GGCGGGACGT GCCGACGCTG
TTCCTGACCG CTCGCGACAC CACCGAGGAC AAGGTGCACG GGCTGACGCT CGGCGGCGAC
GACTACGTCA CGAAGCCGTT CGTGGTCAGT GAACTGGTCG CCCGGGTCCG GGCGATCCTG
CGCCGGGCCG GAATGGCCGA CGGCGCGCCG GAGCCGCTGC GCTTCGCCGA TCTCGAGCTG
GACCCGGAGA CCCGCGAGGT GCGCCGGGCC GGGCGCCTCG TCGAGCTGAC CGTCACCGAG
TACCGGCTGC TGCACTACCT GCTGGTCAAC GCCCGCAAGG TGCTGACCCG GGCCCAACTC
CTCGACCACG TCTGGGGGCA CGACTTCGGC GGTGACGCCC GGGTCCTGGA GACCTACGTC
AGCTATCTGC GCCGCAAGAT CGACGACGCC CCGCCGGCGC TGATCCACAC GGTGCGCGGG
GTTGGCTACG TGCTGCGCCT GCCGCGGTGA
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| Protein sequence | MERPVRVLVV DDEEAITDLV AMALRYEGFD VSAAHSGQAA LTQVSREPPD LLVLDVMLPD
IDGFAVCQRL RNAGRDVPTL FLTARDTTED KVHGLTLGGD DYVTKPFVVS ELVARVRAIL
RRAGMADGAP EPLRFADLEL DPETREVRRA GRLVELTVTE YRLLHYLLVN ARKVLTRAQL
LDHVWGHDFG GDARVLETYV SYLRRKIDDA PPALIHTVRG VGYVLRLPR
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