Gene Franean1_6557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6557 
Symbol 
ID5674872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7975318 
End bp7976595 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID641245406 
Productmethyltransferase type 12 
Protein accessionYP_001510800 
Protein GI158318292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG CCCGTCCCCC CTGCTGTCCG GCATGCCACG GCACCGCCCT GGAGCCCCTG 
GCGACTATCG AGCGGTCGCC GGTGATGACG GGGGTCCTCT GGCCCTCCCG GCAGGAGGCG
CTTGCCGCGC AGCGGCGGCC ACTGGAGCTG TCGCTCTGCG GCCACTGCGG AACGGCATTC
AACATCGCGT TCGAGGATGG CCTTGTCGAG TATGGCGGGG AGTACGACAA CTCGCTGCAT
TTCTCGCCGG CGTTCCGCTC GTACGCACAG GCGTTGGCGG ATCGTCTCAT TGCCGCCCAC
CAGCTGGCCG GGTGCTCCGT CGTCGAGATC GGCTCGGGCA AGGGCGATTT CCTCCGTCTG
CTGTGCCGGC GAGCGCCGTG CACCGGGACC GGCTACGACC CCACCTACGT CGGGCCGGAC
CACGCTGCCG ACGCCGACGT GCACTTCGTC GTCGACCTGT ACGGTCCGCG CTACTCTGAT
CTCCCCGCAG ATCTTGTGAT CTGCCGGCAT GTTCTCGAGC ACATGGCGGA CCCGCTCGCC
TTCCTCGCCG ATATCCGCAA CGCTCTCGGT GATCGGGACG CGTCGCTGTA CCTCGAGGTG
CCCAACGGGG GCTTCGTCCT CAGCGAGGCC GGGATGTGGG ACTTCATCTA CCCACACGTG
TCGTACTTCT CTCCCGCCGG GCTGCGGCGC GTGGTGACGG CTGCCGGCTT CGCGGTCACC
GACACCGGCA CCTCCTACGG GGACCAGTTT CTCTGGATCG AGGCCAGGAC GGCCTCACCG
GTTGTTCCCC ACGCTCGGAT CGGTTCCACC GCTGACAAGG ACTCTTCCGG CGACACGACC
CGATTCGTGG CACAGGCACG GGCATTCGGC GACATGTACC GGGGGATGGT CCAACGCGCC
GCCACCGAGA TCGGCGGCAG CTCGGCCGGT CCCGCGCGGG ATGCGCCATG CGTGCTGCTC
TGGGGAGCGG GGTCCAAGGG AGTGACGCTG CTCAATGTGC TCGACCCCGG TCCCGCGGTG
CGGGCGGTGG TCGATCTCAA CCCGCGCAAG AGGGGCCTGT TCATTCCCGG CACCGGGCAC
CGGGTGCTGG CGCCCGAGGA CGTGCCGGCG CAGCGCGTGG ATCGGGTGCT GCTGCCGAAC
CCGCTGTACC TCGACGAGGT CCGCGACCTT CTAGCGCAAC TGGGAGTGCG CGCGGACGTC
GTCCCTCTCG GCAGTCGGGG TCCTGTCCCT GCACAGCAGC TGGCCGACGC TCCGGAGAAG
GATGGTGTGA AGTCATGA
 
Protein sequence
MSAARPPCCP ACHGTALEPL ATIERSPVMT GVLWPSRQEA LAAQRRPLEL SLCGHCGTAF 
NIAFEDGLVE YGGEYDNSLH FSPAFRSYAQ ALADRLIAAH QLAGCSVVEI GSGKGDFLRL
LCRRAPCTGT GYDPTYVGPD HAADADVHFV VDLYGPRYSD LPADLVICRH VLEHMADPLA
FLADIRNALG DRDASLYLEV PNGGFVLSEA GMWDFIYPHV SYFSPAGLRR VVTAAGFAVT
DTGTSYGDQF LWIEARTASP VVPHARIGST ADKDSSGDTT RFVAQARAFG DMYRGMVQRA
ATEIGGSSAG PARDAPCVLL WGAGSKGVTL LNVLDPGPAV RAVVDLNPRK RGLFIPGTGH
RVLAPEDVPA QRVDRVLLPN PLYLDEVRDL LAQLGVRADV VPLGSRGPVP AQQLADAPEK
DGVKS