Gene Franean1_6498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6498 
Symbol 
ID5674813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7900334 
End bp7900888 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID641245346 
Producthypothetical protein 
Protein accessionYP_001510741 
Protein GI158318233 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.188707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.480601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTC CTGCCTGGAT GCATCAGCAG ATCACGGCGG AGCAGTACGA CTCCTGGTCC 
GAGGAGCAGT GCGCGGGCAT CGAGATCGTG GACGGAATGA TCGTCGTGAG TCCCAGCGCG
TCCAAGCGTC ACAACCGGCT GATCAAGATC CTCGCGGTCG CCCTGGAGTC GGCGGCCGGG
CCGGACTGGA ACGCGGACTT CGACTTCGAC GTCCGGCTTC AGGATGTGCC GCTGACGAAT
CGGCGTCCGG ACGTGGTCGT GTACCGTGCC GACACGATCG ACATCATGCC GGCTCGTCCC
GAGCACATCC TGCTCGTTGC CGAGGTCGTC TCGCCCGGTT CGGAGACGAC GGATCGGATC
GTCAAGGCCG AGCAGTACGC GAGAGCTGGA ATCTCGTACT ACTGGCGAGT CGAGCAGCCC
CCCGCCGGCG TCCCGGTCGT CCATACCTGC GTCCTTGACC CGGCGACCGG GACGTACCGC
GATGGCGAGG TCTTCACGGG CGTCGTCGAC GCCGTTGCCC CCTTCCCGGT CAAGGTTGAT
CTCACTCAGC TGTAG
 
Protein sequence
MIAPAWMHQQ ITAEQYDSWS EEQCAGIEIV DGMIVVSPSA SKRHNRLIKI LAVALESAAG 
PDWNADFDFD VRLQDVPLTN RRPDVVVYRA DTIDIMPARP EHILLVAEVV SPGSETTDRI
VKAEQYARAG ISYYWRVEQP PAGVPVVHTC VLDPATGTYR DGEVFTGVVD AVAPFPVKVD
LTQL