Gene Franean1_6482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6482 
Symbol 
ID5674797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7880661 
End bp7881179 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content71% 
IMG OID641245330 
ProductMarR family transcriptional regulator 
Protein accessionYP_001510725 
Protein GI158318217 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.618469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.143744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAGC GATACCCGGG ACCGAGACGG CCGGCCGAGG AGACCGACCC CGGCCGCGCG 
CGGCCCGTAG CAGACCTGTC GACACACCCC GGACAGCTTG CCCGCCGTCT GCAGCAGGTC
ACATATCAAC TGTGGACCGC CACTGTGTCC ACCGAGACAA CCCCGCCACA GTTCGTGGTT
CTCAACAGCC TGCTCGCCGA CCCCGACATC GACCAGCGCA CGCTGGGCGA ACGGGCGTCG
CTGGACCGCT CCACCGTCGC CGACGTGGTC GCGCGACTGG TGCAGCGGGG GCTGATCCGC
CGCGTGCGCG ATCCCCGTGA CGGCCGCCGC AACGTACTGC GGCTCACGCA GCGCGGCGAA
TCGACGCACA GCCATGTCGC TGGGCGGGTG GAGCGGATGA ACGACCTCCT GCTCTCCCCG
CTCTCGGCGG ACGAACGCAC CGCCCTGCTC TCCATGCTGA CGCGGATCGT CGAGTCCGTG
CCGGCGATCT CGGCGGCCGA GGGGAACGCC GCCGTCTGA
 
Protein sequence
MNQRYPGPRR PAEETDPGRA RPVADLSTHP GQLARRLQQV TYQLWTATVS TETTPPQFVV 
LNSLLADPDI DQRTLGERAS LDRSTVADVV ARLVQRGLIR RVRDPRDGRR NVLRLTQRGE
STHSHVAGRV ERMNDLLLSP LSADERTALL SMLTRIVESV PAISAAEGNA AV