| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6469 |
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| Symbol | |
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| ID | 5674784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7863553 |
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| End bp | 7864344 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641245317 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001510712 |
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| Protein GI | 158318204 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0477636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGACT TCCGGAACCG GACCGCGCTG GTCACGGGGG CCTCGTCGGG TATCGGGGCC
GCGTTCGCCG AGGCGCTCGC GGCACGCGGG GCCGATCTCG TGCTCGCCGC GCCGTCCGAG
GAGAAGCTGC GGCCGGTGGC CGAGCGGCTG CGCGCTCTGC ACGGGGTGCG GGTGTGGATG
GTCCCGGTCG ACCTCGCCCG GGAGGACGGC CCGGACCTGC TCGTCGAACA GGTCCGGGCG
ACCGGTCGCG AGATCGACGT CCTGGTGAAC AACGCCGGGT TCGGCACCTA CGGCCGGTAC
GAGGAGCTGC CCGCCGACCG TGACCACCGC GAGGTCATGG TGGACGTCGT CGCGGTCGAA
CGGGTGACGC ACCTGCTCCT GCCGGCGATG GTCGAGCGGG GCCGCGGCAC CGTCGTCAAC
GTGTCGTCGA CGTCGGGGTT CCAGGCCGTC CCGTACATGG CTGTGTACGG GGCGTCGAAG
GCGTTCGTGT TGTCCTTCTC GATCGCGCTG TGGGCGGAGT ACCGGTCGCG CGGAATCCGG
GTGCTGGCGG TATGCCCGGG GCCGACCGAC ACGAACTTCT TCGAGGTCCT CGGCCGGCGG
ATGAGCGCCG GTGGACGGCT GCGCACCACC GACGAGGTCG TCTCGGCCGC CTTCCGCGGC
CTCGACCGCG GCCTGCCCTA CGTGATCGAC GGCCGGCTCA ACTACCTGAC CTCGAACGCG
TCCCGCCTGC TGGGCCGCGG GCTCGTCGCG GGGATCACGG CCCGGACACT CCGGCCGCGC
GGGCGTCCCT GA
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| Protein sequence | MTDFRNRTAL VTGASSGIGA AFAEALAARG ADLVLAAPSE EKLRPVAERL RALHGVRVWM
VPVDLAREDG PDLLVEQVRA TGREIDVLVN NAGFGTYGRY EELPADRDHR EVMVDVVAVE
RVTHLLLPAM VERGRGTVVN VSSTSGFQAV PYMAVYGASK AFVLSFSIAL WAEYRSRGIR
VLAVCPGPTD TNFFEVLGRR MSAGGRLRTT DEVVSAAFRG LDRGLPYVID GRLNYLTSNA
SRLLGRGLVA GITARTLRPR GRP
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